Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC2.61□□□□□ -1.99
PKHD1P08F94 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PKHD1P08F94 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC2.61□□□□□ -1.99
PKHD1P08F94 LINC02035-201ENST00000610128 5476 ntBASIC2.61□□□□□ -1.99
PKHD1P08F94 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PKHD1P08F94 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PKHD1P08F94 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
PKHD1P08F94 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC2.61□□□□□ -1.99
PKHD1P08F94 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PKHD1P08F94 CBX1P3-201ENST00000413296 527 ntBASIC2.61□□□□□ -1.99
PKHD1P08F94 PCNPP4-201ENST00000414817 517 ntBASIC2.61□□□□□ -1.99
PKHD1P08F94 AL391219.1-201ENST00000422570 483 ntBASIC2.61□□□□□ -1.99
PKHD1P08F94 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC2.61□□□□□ -1.99
PKHD1P08F94 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC2.61□□□□□ -1.99
PKHD1P08F94 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC2.61□□□□□ -1.99
PKHD1P08F94 AC015726.1-201ENST00000602353 681 ntBASIC2.61□□□□□ -1.99
PKHD1P08F94 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
PKHD1P08F94 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.61□□□□□ -1.99
PKHD1P08F94 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PKHD1P08F94 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PKHD1P08F94 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC2.61□□□□□ -1.99
PKHD1P08F94 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PKHD1P08F94 AC011755.1-201ENST00000623763 2049 ntBASIC2.61□□□□□ -1.99
PKHD1P08F94 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PKHD1P08F94 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
PKHD1P08F94 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
PKHD1P08F94 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC2.61□□□□□ -1.99
PKHD1P08F94 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC2.61□□□□□ -1.99
PKHD1P08F94 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
PKHD1P08F94 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.61□□□□□ -1.99
PKHD1P08F94 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC2.61□□□□□ -1.99
PKHD1P08F94 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC2.61□□□□□ -1.99
PKHD1P08F94 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.61□□□□□ -1.99
PKHD1P08F94 TCEA1P2-201ENST00000420496 906 ntBASIC2.61□□□□□ -1.99
PKHD1P08F94 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.61□□□□□ -1.99
PKHD1P08F94 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC2.61□□□□□ -1.99
PKHD1P08F94 RPS27AP1-201ENST00000475545 471 ntBASIC2.61□□□□□ -1.99
PKHD1P08F94 RN7SKP57-201ENST00000517248 293 ntBASIC2.61□□□□□ -1.99
PKHD1P08F94 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.61□□□□□ -1.99
PKHD1P08F94 AC006077.1-201ENST00000604746 343 ntBASIC2.61□□□□□ -1.99
PKHD1P08F94 AC107294.1-201ENST00000609524 467 ntBASIC2.61□□□□□ -1.99
PKHD1P08F94 AC016957.2-201ENST00000616998 848 ntBASIC2.61□□□□□ -1.99
PKHD1P08F94 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.61□□□□□ -1.99
PKHD1P08F94 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC2.61□□□□□ -1.99
PKHD1P08F94 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC2.61□□□□□ -1.99
PKHD1P08F94 MTCO1P12-201ENST00000414273 1543 ntBASIC2.61□□□□□ -1.99
PKHD1P08F94 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC2.61□□□□□ -1.99
PKHD1P08F94 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PKHD1P08F94 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PKHD1P08F94 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PKHD1P08F94 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC2.6□□□□□ -1.99
PKHD1P08F94 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PKHD1P08F94 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC2.6□□□□□ -1.99
PKHD1P08F94 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PKHD1P08F94 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
PKHD1P08F94 SNORD3H-201ENST00000384486 214 ntBASIC2.6□□□□□ -1.99
PKHD1P08F94 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
PKHD1P08F94 CYCSP4-201ENST00000429682 331 ntBASIC2.6□□□□□ -1.99
PKHD1P08F94 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC2.6□□□□□ -1.99
PKHD1P08F94 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC2.6□□□□□ -1.99
PKHD1P08F94 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.6□□□□□ -1.99
PKHD1P08F94 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.6□□□□□ -1.99
PKHD1P08F94 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PKHD1P08F94 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.6□□□□□ -1.99
PKHD1P08F94 AC037471.2-201ENST00000564941 598 ntBASIC2.6□□□□□ -1.99
PKHD1P08F94 AC091178.1-203ENST00000584586 279 ntBASIC2.6□□□□□ -1.99
PKHD1P08F94 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC2.6□□□□□ -1.99
PKHD1P08F94 MIR7112-201ENST00000616126 65 ntBASIC2.6□□□□□ -1.99
PKHD1P08F94 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.6□□□□□ -1.99
PKHD1P08F94 AC083899.2-201ENST00000423285 1376 ntBASIC2.6□□□□□ -1.99
PKHD1P08F94 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PKHD1P08F94 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
PKHD1P08F94 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC2.6□□□□□ -1.99
PKHD1P08F94 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PKHD1P08F94 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PKHD1P08F94 RNU2-65P-201ENST00000410162 185 ntBASIC2.6□□□□□ -1.99
PKHD1P08F94 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC2.6□□□□□ -1.99
PKHD1P08F94 RPL7P22-201ENST00000466005 733 ntBASIC2.6□□□□□ -1.99
PKHD1P08F94 RPS3AP6-201ENST00000484430 795 ntBASIC2.6□□□□□ -1.99
PKHD1P08F94 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PKHD1P08F94 Y_RNA.673-201ENST00000516306 88 ntBASIC2.6□□□□□ -1.99
PKHD1P08F94 RN7SKP289-201ENST00000517244 295 ntBASIC2.6□□□□□ -1.99
PKHD1P08F94 AF001550.2-201ENST00000636643 217 ntBASIC2.6□□□□□ -1.99
PKHD1P08F94 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC2.6□□□□□ -1.99
PKHD1P08F94 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
PKHD1P08F94 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PKHD1P08F94 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PKHD1P08F94 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
PKHD1P08F94 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PKHD1P08F94 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.6□□□□□ -1.99
PKHD1P08F94 AL158156.1-201ENST00000422509 473 ntBASIC2.6□□□□□ -1.99
PKHD1P08F94 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.6□□□□□ -1.99
PKHD1P08F94 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.6□□□□□ -1.99
PKHD1P08F94 FTH1P9-201ENST00000513251 355 ntBASIC2.6□□□□□ -1.99
PKHD1P08F94 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC2.6□□□□□ -1.99
PKHD1P08F94 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.6□□□□□ -1.99
PKHD1P08F94 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC2.6□□□□□ -1.99
PKHD1P08F94 AC020914.6-201ENST00000594327 272 ntBASIC2.6□□□□□ -1.99
PKHD1P08F94 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.6□□□□□ -1.99
PKHD1P08F94 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms