Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.62□□□□□ -1.67
APOEP02649 C1GALT1P3-201ENST00000522049 819 ntBASIC4.62□□□□□ -1.67
APOEP02649 AC100770.1-201ENST00000532310 322 ntBASIC4.62□□□□□ -1.67
APOEP02649 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.62□□□□□ -1.67
APOEP02649 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
APOEP02649 HMGB3P26-201ENST00000560051 582 ntBASIC4.62□□□□□ -1.67
APOEP02649 MIR4277-201ENST00000578298 84 ntBASIC4.62□□□□□ -1.67
APOEP02649 AC008759.1-201ENST00000589783 983 ntBASIC4.62□□□□□ -1.67
APOEP02649 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.62□□□□□ -1.67
APOEP02649 AF230666.2-201ENST00000602328 725 ntBASIC4.62□□□□□ -1.67
APOEP02649 AP002360.3-201ENST00000607673 710 ntBASIC4.62□□□□□ -1.67
APOEP02649 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
APOEP02649 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
APOEP02649 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.62□□□□□ -1.67
APOEP02649 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.62□□□□□ -1.67
APOEP02649 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
APOEP02649 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
APOEP02649 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
APOEP02649 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
APOEP02649 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.61□□□□□ -1.67
APOEP02649 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.61□□□□□ -1.67
APOEP02649 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
APOEP02649 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.61□□□□□ -1.67
APOEP02649 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
APOEP02649 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
APOEP02649 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
APOEP02649 Y_RNA.625-201ENST00000411256 107 ntBASIC4.61□□□□□ -1.67
APOEP02649 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
APOEP02649 RPL18P10-201ENST00000425606 538 ntBASIC4.61□□□□□ -1.67
APOEP02649 NPM1P48-201ENST00000436002 853 ntBASIC4.61□□□□□ -1.67
APOEP02649 AL357520.1-201ENST00000441557 453 ntBASIC4.61□□□□□ -1.67
APOEP02649 RPS27AP15-201ENST00000447672 466 ntBASIC4.61□□□□□ -1.67
APOEP02649 DDX39BP2-208ENST00000453923 258 ntBASIC4.61□□□□□ -1.67
APOEP02649 RPL23AP24-201ENST00000458203 385 ntBASIC4.61□□□□□ -1.67
APOEP02649 AC053481.1-201ENST00000467217 306 ntBASIC4.61□□□□□ -1.67
APOEP02649 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.61□□□□□ -1.67
APOEP02649 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.61□□□□□ -1.67
APOEP02649 AC083829.1-201ENST00000503756 657 ntBASIC4.61□□□□□ -1.67
APOEP02649 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.61□□□□□ -1.67
APOEP02649 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.61□□□□□ -1.67
APOEP02649 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.61□□□□□ -1.67
APOEP02649 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.61□□□□□ -1.67
APOEP02649 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.61□□□□□ -1.67
APOEP02649 AC090181.2-201ENST00000602975 672 ntBASIC4.61□□□□□ -1.67
APOEP02649 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.61□□□□□ -1.67
APOEP02649 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
APOEP02649 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
APOEP02649 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.61□□□□□ -1.67
APOEP02649 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
APOEP02649 AC068254.2-201ENST00000623938 3577 ntBASIC4.6□□□□□ -1.67
APOEP02649 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.6□□□□□ -1.67
APOEP02649 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
APOEP02649 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
APOEP02649 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
APOEP02649 OR5P1P-201ENST00000299512 925 ntBASIC4.6□□□□□ -1.67
APOEP02649 MIR448-201ENST00000362131 111 ntBASIC4.6□□□□□ -1.67
APOEP02649 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
APOEP02649 RPS20P14-201ENST00000412545 360 ntBASIC4.6□□□□□ -1.67
APOEP02649 OR51A6P-201ENST00000418680 1004 ntBASIC4.6□□□□□ -1.67
APOEP02649 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.6□□□□□ -1.67
APOEP02649 ARAFP1-201ENST00000422172 605 ntBASIC4.6□□□□□ -1.67
APOEP02649 FTH1P16-201ENST00000435241 552 ntBASIC4.6□□□□□ -1.67
APOEP02649 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.6□□□□□ -1.67
APOEP02649 PHBP16-201ENST00000446318 950 ntBASIC4.6□□□□□ -1.67
APOEP02649 AL162388.1-201ENST00000450912 352 ntBASIC4.6□□□□□ -1.67
APOEP02649 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
APOEP02649 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.6□□□□□ -1.67
APOEP02649 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
APOEP02649 RPL7P32-201ENST00000457119 744 ntBASIC4.6□□□□□ -1.67
APOEP02649 PSMC1P13-201ENST00000458195 985 ntBASIC4.6□□□□□ -1.67
APOEP02649 AC092905.1-201ENST00000467527 949 ntBASIC4.6□□□□□ -1.67
APOEP02649 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.6□□□□□ -1.67
APOEP02649 RN7SL810P-201ENST00000493031 276 ntBASIC4.6□□□□□ -1.67
APOEP02649 RN7SL812P-201ENST00000493791 279 ntBASIC4.6□□□□□ -1.67
APOEP02649 AC034205.1-201ENST00000520621 638 ntBASIC4.6□□□□□ -1.67
APOEP02649 AC090281.1-201ENST00000523019 276 ntBASIC4.6□□□□□ -1.67
APOEP02649 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.6□□□□□ -1.67
APOEP02649 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.6□□□□□ -1.67
APOEP02649 HIGD1AP5-201ENST00000529959 259 ntBASIC4.6□□□□□ -1.67
APOEP02649 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
APOEP02649 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.6□□□□□ -1.67
APOEP02649 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.6□□□□□ -1.67
APOEP02649 AC010201.1-201ENST00000605051 540 ntBASIC4.6□□□□□ -1.67
APOEP02649 AL023583.1-201ENST00000607518 1143 ntBASIC4.6□□□□□ -1.67
APOEP02649 AC026368.1-201ENST00000614934 690 ntBASIC4.6□□□□□ -1.67
APOEP02649 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.6□□□□□ -1.67
APOEP02649 AL121873.1-201ENST00000616013 524 ntBASIC4.6□□□□□ -1.67
APOEP02649 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.6□□□□□ -1.67
APOEP02649 AC055839.1-201ENST00000634467 498 ntBASIC4.6□□□□□ -1.67
APOEP02649 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.6□□□□□ -1.67
APOEP02649 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.6□□□□□ -1.67
APOEP02649 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.6□□□□□ -1.67
APOEP02649 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
APOEP02649 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
APOEP02649 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.59□□□□□ -1.67
APOEP02649 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
APOEP02649 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
APOEP02649 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
APOEP02649 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
APOEP02649 RNU1-130P-201ENST00000363930 160 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms