Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC067904.2-201ENST00000517322 1283 ntBASIC3.75□□□□□ -1.81
UPK1BO75841 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.75□□□□□ -1.81
UPK1BO75841 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
UPK1BO75841 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC3.75□□□□□ -1.81
UPK1BO75841 AC007599.1-201ENST00000568688 1174 ntBASIC3.75□□□□□ -1.81
UPK1BO75841 OR1F2P-201ENST00000570470 933 ntBASIC3.75□□□□□ -1.81
UPK1BO75841 MIR3154-201ENST00000577829 84 ntBASIC3.75□□□□□ -1.81
UPK1BO75841 AC090312.1-201ENST00000580637 348 ntBASIC3.75□□□□□ -1.81
UPK1BO75841 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC3.75□□□□□ -1.81
UPK1BO75841 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.75□□□□□ -1.81
UPK1BO75841 MRPS35P3-201ENST00000603189 709 ntBASIC3.75□□□□□ -1.81
UPK1BO75841 MTCO2P22-201ENST00000603246 681 ntBASIC3.75□□□□□ -1.81
UPK1BO75841 AL359091.2-201ENST00000609303 556 ntBASIC3.75□□□□□ -1.81
UPK1BO75841 AC107905.1-201ENST00000616204 426 ntBASIC3.75□□□□□ -1.81
UPK1BO75841 AC005899.6-201ENST00000620729 297 ntBASIC3.75□□□□□ -1.81
UPK1BO75841 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.75□□□□□ -1.81
UPK1BO75841 CASC19-222ENST00000641321 1173 ntBASIC3.75□□□□□ -1.81
UPK1BO75841 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.75□□□□□ -1.81
UPK1BO75841 AC025031.4-201ENST00000621248 3271 ntBASIC3.75□□□□□ -1.81
UPK1BO75841 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
UPK1BO75841 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
UPK1BO75841 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
UPK1BO75841 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
UPK1BO75841 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
UPK1BO75841 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
UPK1BO75841 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.74□□□□□ -1.81
UPK1BO75841 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
UPK1BO75841 AC090017.1-201ENST00000548612 1779 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.74□□□□□ -1.81
UPK1BO75841 ASNSP1-201ENST00000518311 1939 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 PNPT1P2-201ENST00000456768 2050 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
UPK1BO75841 SNURFL-201ENST00000309296 343 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC3.74□□□□□ -1.81
UPK1BO75841 U3.2-201ENST00000362981 210 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 RNA5SP455-201ENST00000365190 119 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.74□□□□□ -1.81
UPK1BO75841 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
UPK1BO75841 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
UPK1BO75841 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
UPK1BO75841 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
UPK1BO75841 DUTP5-201ENST00000406790 469 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
UPK1BO75841 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.74□□□□□ -1.81
UPK1BO75841 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.74□□□□□ -1.81
UPK1BO75841 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC3.74□□□□□ -1.81
UPK1BO75841 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 RPA2P2-201ENST00000419698 796 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
UPK1BO75841 RPL12P46-201ENST00000436610 195 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 RPL7P11-201ENST00000437586 658 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.74□□□□□ -1.81
UPK1BO75841 RPS5P7-201ENST00000456664 608 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 AC010307.1-201ENST00000467206 836 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.74□□□□□ -1.81
UPK1BO75841 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
UPK1BO75841 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
UPK1BO75841 NIPA2P2-201ENST00000496376 1083 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 KCTD9P2-201ENST00000512203 1013 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.74□□□□□ -1.81
UPK1BO75841 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC3.74□□□□□ -1.81
UPK1BO75841 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.74□□□□□ -1.81
UPK1BO75841 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.74□□□□□ -1.81
UPK1BO75841 CASP1P2-201ENST00000526830 1258 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.74□□□□□ -1.81
UPK1BO75841 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.74□□□□□ -1.81
UPK1BO75841 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC3.74□□□□□ -1.81
UPK1BO75841 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
UPK1BO75841 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC3.74□□□□□ -1.81
UPK1BO75841 AC006512.2-201ENST00000543250 486 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.74□□□□□ -1.81
UPK1BO75841 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.74□□□□□ -1.81
UPK1BO75841 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.74□□□□□ -1.81
UPK1BO75841 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC3.74□□□□□ -1.81
UPK1BO75841 AC027176.2-201ENST00000559166 746 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.74□□□□□ -1.81
UPK1BO75841 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.74□□□□□ -1.81
UPK1BO75841 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.74□□□□□ -1.81
UPK1BO75841 AP001521.2-201ENST00000608772 546 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.74□□□□□ -1.81
UPK1BO75841 AC116447.1-201ENST00000613153 453 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 AC093535.2-201ENST00000624769 2326 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
UPK1BO75841 OR2L1P-202ENST00000641567 1023 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 AC134882.1-201ENST00000603738 1676 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.74□□□□□ -1.81
UPK1BO75841 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
UPK1BO75841 TNPO1P3-201ENST00000436471 2662 ntBASIC3.74□□□□□ -1.81
UPK1BO75841 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
UPK1BO75841 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
UPK1BO75841 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
UPK1BO75841 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
UPK1BO75841 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
UPK1BO75841 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
UPK1BO75841 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC3.73□□□□□ -1.81
UPK1BO75841 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.73□□□□□ -1.81
UPK1BO75841 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.73□□□□□ -1.81
UPK1BO75841 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.73□□□□□ -1.81
UPK1BO75841 RN7SKP184-201ENST00000362348 333 ntBASIC3.73□□□□□ -1.81
UPK1BO75841 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms