Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC093849.1-201ENST00000563631 2209 ntBASIC4.91□□□□□ -1.62
LDB2O43679 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
LDB2O43679 RN7SKP95-201ENST00000362860 303 ntBASIC4.91□□□□□ -1.62
LDB2O43679 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LDB2O43679 RNU6-906P-201ENST00000384700 70 ntBASIC4.91□□□□□ -1.62
LDB2O43679 AL603865.2-201ENST00000401679 213 ntBASIC4.91□□□□□ -1.62
LDB2O43679 AL021331.1-201ENST00000402817 582 ntBASIC4.91□□□□□ -1.62
LDB2O43679 CTSL3P-202ENST00000412179 788 ntBASIC4.91□□□□□ -1.62
LDB2O43679 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.91□□□□□ -1.62
LDB2O43679 TBCAP2-201ENST00000416175 326 ntBASIC4.91□□□□□ -1.62
LDB2O43679 USP9YP21-201ENST00000420603 432 ntBASIC4.91□□□□□ -1.62
LDB2O43679 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.91□□□□□ -1.62
LDB2O43679 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.91□□□□□ -1.62
LDB2O43679 AC093414.1-201ENST00000434712 514 ntBASIC4.91□□□□□ -1.62
LDB2O43679 AC093716.1-201ENST00000435923 377 ntBASIC4.91□□□□□ -1.62
LDB2O43679 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.91□□□□□ -1.62
LDB2O43679 VN1R25P-201ENST00000443385 738 ntBASIC4.91□□□□□ -1.62
LDB2O43679 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.91□□□□□ -1.62
LDB2O43679 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.91□□□□□ -1.62
LDB2O43679 AC091685.2-201ENST00000454924 864 ntBASIC4.91□□□□□ -1.62
LDB2O43679 RPL23AP56-201ENST00000460778 453 ntBASIC4.91□□□□□ -1.62
LDB2O43679 RPS20P4-201ENST00000461659 355 ntBASIC4.91□□□□□ -1.62
LDB2O43679 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.91□□□□□ -1.62
LDB2O43679 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LDB2O43679 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LDB2O43679 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LDB2O43679 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.91□□□□□ -1.62
LDB2O43679 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.91□□□□□ -1.62
LDB2O43679 Y_RNA.719-201ENST00000517156 106 ntBASIC4.91□□□□□ -1.62
LDB2O43679 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.91□□□□□ -1.62
LDB2O43679 AP001636.2-201ENST00000525517 696 ntBASIC4.91□□□□□ -1.62
LDB2O43679 AP001922.4-201ENST00000526967 290 ntBASIC4.91□□□□□ -1.62
LDB2O43679 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.91□□□□□ -1.62
LDB2O43679 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LDB2O43679 AL049870.4-201ENST00000555741 486 ntBASIC4.91□□□□□ -1.62
LDB2O43679 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.91□□□□□ -1.62
LDB2O43679 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.91□□□□□ -1.62
LDB2O43679 AC012254.4-201ENST00000588843 273 ntBASIC4.91□□□□□ -1.62
LDB2O43679 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.91□□□□□ -1.62
LDB2O43679 AC006363.1-201ENST00000603806 463 ntBASIC4.91□□□□□ -1.62
LDB2O43679 AC002487.1-201ENST00000604565 994 ntBASIC4.91□□□□□ -1.62
LDB2O43679 AC079610.2-201ENST00000604818 690 ntBASIC4.91□□□□□ -1.62
LDB2O43679 AL049539.1-201ENST00000611964 459 ntBASIC4.91□□□□□ -1.62
LDB2O43679 AC006386.1-201ENST00000619436 415 ntBASIC4.91□□□□□ -1.62
LDB2O43679 AL022401.1-201ENST00000619498 108 ntBASIC4.91□□□□□ -1.62
LDB2O43679 AC074140.1-201ENST00000621617 208 ntBASIC4.91□□□□□ -1.62
LDB2O43679 AC019206.1-201ENST00000621938 425 ntBASIC4.91□□□□□ -1.62
LDB2O43679 AC104985.3-201ENST00000623479 597 ntBASIC4.91□□□□□ -1.62
LDB2O43679 AP001784.1-201ENST00000624107 428 ntBASIC4.91□□□□□ -1.62
LDB2O43679 AL022393.1-201ENST00000625142 1677 ntBASIC4.91□□□□□ -1.62
LDB2O43679 THAP12P5-201ENST00000405864 2275 ntBASIC4.91□□□□□ -1.62
LDB2O43679 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LDB2O43679 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.91□□□□□ -1.62
LDB2O43679 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LDB2O43679 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LDB2O43679 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.91□□□□□ -1.62
LDB2O43679 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.91□□□□□ -1.62
LDB2O43679 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LDB2O43679 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
LDB2O43679 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
LDB2O43679 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
LDB2O43679 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
LDB2O43679 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
LDB2O43679 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LDB2O43679 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LDB2O43679 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.9□□□□□ -1.63
LDB2O43679 AC005005.2-201ENST00000420779 380 ntBASIC4.9□□□□□ -1.63
LDB2O43679 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.9□□□□□ -1.63
LDB2O43679 RPL12P28-201ENST00000430852 489 ntBASIC4.9□□□□□ -1.63
LDB2O43679 AC092162.1-201ENST00000432828 434 ntBASIC4.9□□□□□ -1.63
LDB2O43679 AL035458.1-201ENST00000433096 585 ntBASIC4.9□□□□□ -1.63
LDB2O43679 MTCYBP31-201ENST00000438855 1122 ntBASIC4.9□□□□□ -1.63
LDB2O43679 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.9□□□□□ -1.63
LDB2O43679 Z73417.1-201ENST00000447373 778 ntBASIC4.9□□□□□ -1.63
LDB2O43679 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.9□□□□□ -1.63
LDB2O43679 AC113420.1-201ENST00000507903 571 ntBASIC4.9□□□□□ -1.63
LDB2O43679 AC005351.1-201ENST00000511152 786 ntBASIC4.9□□□□□ -1.63
LDB2O43679 AC087888.1-201ENST00000550884 1254 ntBASIC4.9□□□□□ -1.63
LDB2O43679 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.9□□□□□ -1.63
LDB2O43679 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.9□□□□□ -1.63
LDB2O43679 CYCSP40-201ENST00000575927 294 ntBASIC4.9□□□□□ -1.63
LDB2O43679 MIR4789-201ENST00000577469 82 ntBASIC4.9□□□□□ -1.63
LDB2O43679 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.9□□□□□ -1.63
LDB2O43679 RN7SL622P-201ENST00000585292 275 ntBASIC4.9□□□□□ -1.63
LDB2O43679 AC011453.2-201ENST00000603737 729 ntBASIC4.9□□□□□ -1.63
LDB2O43679 AC010424.2-201ENST00000607594 443 ntBASIC4.9□□□□□ -1.63
LDB2O43679 PART1_2.1-201ENST00000612397 250 ntBASIC4.9□□□□□ -1.63
LDB2O43679 AL355493.4-201ENST00000618530 292 ntBASIC4.9□□□□□ -1.63
LDB2O43679 AC112694.2-201ENST00000623697 768 ntBASIC4.9□□□□□ -1.63
LDB2O43679 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
LDB2O43679 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
LDB2O43679 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.9□□□□□ -1.63
LDB2O43679 AL355578.1-201ENST00000607405 1328 ntBASIC4.9□□□□□ -1.63
LDB2O43679 ZNF849P-201ENST00000594711 1566 ntBASIC4.9□□□□□ -1.63
LDB2O43679 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LDB2O43679 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LDB2O43679 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.89□□□□□ -1.63
LDB2O43679 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LDB2O43679 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.89□□□□□ -1.63
LDB2O43679 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms