Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH17O14917 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 SGO1P1-201ENST00000603525 1447 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDH17O14917 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH17O14917 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDH17O14917 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDH17O14917 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH17O14917 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
PCDH17O14917 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
PCDH17O14917 PCAT14-202ENST00000627127 3935 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PCDH17O14917 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH17O14917 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PCDH17O14917 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
PCDH17O14917 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH17O14917 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH17O14917 NACA3P-201ENST00000359690 648 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 RNA5SP335-201ENST00000363817 110 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 MIR16-1-201ENST00000385271 89 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH17O14917 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH17O14917 RPSAP35-201ENST00000413753 818 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH17O14917 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDH17O14917 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDH17O14917 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDH17O14917 AC010099.3-201ENST00000423896 409 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDH17O14917 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDH17O14917 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDH17O14917 HIGD1AP4-201ENST00000430194 280 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 MTCO2P20-201ENST00000437339 673 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 UBE2V1P5-201ENST00000440070 405 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 Z77249.1-201ENST00000444622 1175 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 EEF1B2P5-201ENST00000444820 548 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 GAPDHP25-201ENST00000447061 1001 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 PTENP1-201ENST00000447117 1215 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 AC007327.1-201ENST00000447461 264 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDH17O14917 MRPL35P4-201ENST00000453682 566 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDH17O14917 AC004263.1-201ENST00000479327 332 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 RN7SL826P-201ENST00000479724 288 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 GAPDHP39-201ENST00000481866 979 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH17O14917 NDUFA5P12-201ENST00000503796 343 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDH17O14917 AC021106.1-201ENST00000509020 1058 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDH17O14917 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDH17O14917 AC091912.1-201ENST00000511351 248 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDH17O14917 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDH17O14917 MTATP6P15-201ENST00000527233 835 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDH17O14917 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH17O14917 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDH17O14917 LSM3P2-201ENST00000551246 273 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.13□□□□□ -1.59
PCDH17O14917 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH17O14917 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH17O14917 AC061975.8-201ENST00000587058 721 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 AP001269.3-201ENST00000588718 329 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDH17O14917 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDH17O14917 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH17O14917 AP002791.1-201ENST00000623291 381 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 AC022031.1-201ENST00000585985 2593 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PCDH17O14917 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH17O14917 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH17O14917 STX3-208ENST00000641815 3236 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH17O14917 CASC19-206ENST00000641028 1430 ntBASIC5.13□□□□□ -1.59
PCDH17O14917 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
PCDH17O14917 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.13□□□□□ -1.59
PCDH17O14917 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH17O14917 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDH17O14917 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDH17O14917 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDH17O14917 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDH17O14917 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
PCDH17O14917 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PCDH17O14917 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
PCDH17O14917 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDH17O14917 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDH17O14917 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDH17O14917 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDH17O14917 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.12□□□□□ -1.59
PCDH17O14917 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDH17O14917 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDH17O14917 RNU1-74P-201ENST00000384108 171 ntBASIC5.12□□□□□ -1.59
PCDH17O14917 RNA5SP339-201ENST00000390987 122 ntBASIC5.12□□□□□ -1.59
PCDH17O14917 AL645927.1-201ENST00000396783 406 ntBASIC5.12□□□□□ -1.59
PCDH17O14917 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
PCDH17O14917 AL390774.1-201ENST00000411924 246 ntBASIC5.12□□□□□ -1.59
PCDH17O14917 RPL35AP24-201ENST00000413846 330 ntBASIC5.12□□□□□ -1.59
PCDH17O14917 RPL23AP27-201ENST00000415161 451 ntBASIC5.12□□□□□ -1.59
PCDH17O14917 VPS26BP1-201ENST00000417155 755 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms