Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
SOX1O00570 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.55□□□□□ -1.36
SOX1O00570 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SOX1O00570 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SOX1O00570 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.55□□□□□ -1.36
SOX1O00570 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
SOX1O00570 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SOX1O00570 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
SOX1O00570 SELENOWP1-201ENST00000322792 252 ntBASIC6.55□□□□□ -1.36
SOX1O00570 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SOX1O00570 RNU6-1090P-201ENST00000364065 94 ntBASIC6.55□□□□□ -1.36
SOX1O00570 RNU6-619P-201ENST00000365146 108 ntBASIC6.55□□□□□ -1.36
SOX1O00570 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.55□□□□□ -1.36
SOX1O00570 AC025750.1-201ENST00000399891 379 ntBASIC6.55□□□□□ -1.36
SOX1O00570 AC009804.1-201ENST00000400949 179 ntBASIC6.55□□□□□ -1.36
SOX1O00570 ERMN-204ENST00000409925 556 ntTSL 4 BASIC6.55□□□□□ -1.36
SOX1O00570 OR51A3P-201ENST00000413596 924 ntBASIC6.55□□□□□ -1.36
SOX1O00570 FCF1P2-201ENST00000415284 583 ntBASIC6.55□□□□□ -1.36
SOX1O00570 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.55□□□□□ -1.36
SOX1O00570 AF228730.4-201ENST00000421457 183 ntBASIC6.55□□□□□ -1.36
SOX1O00570 AL513174.1-201ENST00000423182 629 ntBASIC6.55□□□□□ -1.36
SOX1O00570 DPY19L1P2-201ENST00000426647 915 ntBASIC6.55□□□□□ -1.36
SOX1O00570 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.55□□□□□ -1.36
SOX1O00570 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.55□□□□□ -1.36
SOX1O00570 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.55□□□□□ -1.36
SOX1O00570 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC6.55□□□□□ -1.36
SOX1O00570 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.55□□□□□ -1.36
SOX1O00570 AC010307.1-201ENST00000467206 836 ntBASIC6.55□□□□□ -1.36
SOX1O00570 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.55□□□□□ -1.36
SOX1O00570 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC6.55□□□□□ -1.36
SOX1O00570 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.55□□□□□ -1.36
SOX1O00570 RN7SL57P-201ENST00000493687 290 ntBASIC6.55□□□□□ -1.36
SOX1O00570 AK6P1-201ENST00000540219 478 ntBASIC6.55□□□□□ -1.36
SOX1O00570 MIR4480-201ENST00000582492 71 ntBASIC6.55□□□□□ -1.36
SOX1O00570 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.55□□□□□ -1.36
SOX1O00570 AC091768.1-201ENST00000609258 930 ntBASIC6.55□□□□□ -1.36
SOX1O00570 AC008250.2-201ENST00000615261 205 ntBASIC6.55□□□□□ -1.36
SOX1O00570 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SOX1O00570 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.55□□□□□ -1.36
SOX1O00570 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SOX1O00570 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SOX1O00570 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
SOX1O00570 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SOX1O00570 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
SOX1O00570 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC6.55□□□□□ -1.36
SOX1O00570 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
SOX1O00570 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SOX1O00570 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
SOX1O00570 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC6.55□□□□□ -1.36
SOX1O00570 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
SOX1O00570 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SOX1O00570 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SOX1O00570 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SOX1O00570 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SOX1O00570 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.54□□□□□ -1.36
SOX1O00570 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.54□□□□□ -1.36
SOX1O00570 UGT2B25P-201ENST00000511504 1586 ntBASIC6.54□□□□□ -1.36
SOX1O00570 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.54□□□□□ -1.36
SOX1O00570 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
SOX1O00570 RPL23P2-201ENST00000320371 421 ntBASIC6.54□□□□□ -1.36
SOX1O00570 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SOX1O00570 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SOX1O00570 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SOX1O00570 RNA5SP498-201ENST00000411342 120 ntBASIC6.54□□□□□ -1.36
SOX1O00570 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC6.54□□□□□ -1.36
SOX1O00570 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.54□□□□□ -1.36
SOX1O00570 BTF3L4P3-201ENST00000418879 476 ntBASIC6.54□□□□□ -1.36
SOX1O00570 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC6.54□□□□□ -1.36
SOX1O00570 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC6.54□□□□□ -1.36
SOX1O00570 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SOX1O00570 MTCO1P20-201ENST00000425366 358 ntBASIC6.54□□□□□ -1.36
SOX1O00570 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.54□□□□□ -1.36
SOX1O00570 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.54□□□□□ -1.36
SOX1O00570 RPL21P110-201ENST00000433345 446 ntBASIC6.54□□□□□ -1.36
SOX1O00570 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.54□□□□□ -1.36
SOX1O00570 CEACAMP7-201ENST00000444105 496 ntBASIC6.54□□□□□ -1.36
SOX1O00570 AC007677.1-201ENST00000445757 515 ntBASIC6.54□□□□□ -1.36
SOX1O00570 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.54□□□□□ -1.36
SOX1O00570 USP9YP12-201ENST00000450481 570 ntBASIC6.54□□□□□ -1.36
SOX1O00570 AC100832.1-201ENST00000471945 383 ntBASIC6.54□□□□□ -1.36
SOX1O00570 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SOX1O00570 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.54□□□□□ -1.36
SOX1O00570 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.54□□□□□ -1.36
SOX1O00570 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.54□□□□□ -1.36
SOX1O00570 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.54□□□□□ -1.36
SOX1O00570 SUMO2P7-201ENST00000511179 285 ntBASIC6.54□□□□□ -1.36
SOX1O00570 SAP18P1-201ENST00000512058 390 ntBASIC6.54□□□□□ -1.36
SOX1O00570 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.54□□□□□ -1.36
SOX1O00570 RFPL4AP3-201ENST00000515267 345 ntBASIC6.54□□□□□ -1.36
SOX1O00570 RNY4P37-201ENST00000516225 96 ntBASIC6.54□□□□□ -1.36
SOX1O00570 AF235103.2-201ENST00000525753 346 ntBASIC6.54□□□□□ -1.36
SOX1O00570 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC6.54□□□□□ -1.36
SOX1O00570 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC6.54□□□□□ -1.36
SOX1O00570 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.54□□□□□ -1.36
SOX1O00570 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.54□□□□□ -1.36
SOX1O00570 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.54□□□□□ -1.36
SOX1O00570 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.54□□□□□ -1.36
SOX1O00570 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.54□□□□□ -1.36
SOX1O00570 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SOX1O00570 AL139286.1-201ENST00000604465 483 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms