Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 AC092121.1-201ENST00000569452 202 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 WBP1LP12-201ENST00000604449 331 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 Z98200.1-201ENST00000607298 470 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 WBP1LP8-201ENST00000617401 327 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 PLCE1P1-201ENST00000622094 305 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC2.34□□□□□ -2.04
CHKB-CPT1BH3BT56 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CHKB-CPT1BH3BT56 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CHKB-CPT1BH3BT56 OR10AB1P-202ENST00000641219 1686 ntBASIC2.34□□□□□ -2.04
CHKB-CPT1BH3BT56 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.34□□□□□ -2.04
CHKB-CPT1BH3BT56 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
CHKB-CPT1BH3BT56 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CHKB-CPT1BH3BT56 CEP170P1-201ENST00000502249 4587 ntBASIC2.34□□□□□ -2.04
CHKB-CPT1BH3BT56 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AC025125.1-201ENST00000624743 1922 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 MAPK10-362ENST00000641864 4484 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 RNA5SP394-201ENST00000364216 119 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 RNA5SP427-201ENST00000365323 119 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 SSX3-202ENST00000376893 800 ntTSL 2 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 MIR197-201ENST00000384976 75 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 HMGN2P8-201ENST00000391458 268 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 YWHAZP6-201ENST00000399764 738 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 GCNT1P4-201ENST00000404096 329 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 ARL4AP5-201ENST00000404372 599 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 NUDT19P3-201ENST00000404698 555 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AL589994.1-201ENST00000404962 340 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 MIR1203-201ENST00000408812 85 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AL139135.1-201ENST00000412675 209 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AL035422.1-201ENST00000414193 397 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 CHEK2P3-201ENST00000416118 248 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AL161631.1-201ENST00000417933 486 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AL133325.1-201ENST00000421090 382 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 Z84478.1-201ENST00000438230 1219 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 EIF2S2P2-201ENST00000447161 982 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 OR52Y1P-201ENST00000452418 828 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 YRDCP3-201ENST00000456507 480 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 TREML3P-201ENST00000457327 501 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AC006517.1-201ENST00000480485 328 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AC016687.1-201ENST00000482574 353 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AC010627.1-201ENST00000503819 1294 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 RN7SKP35-201ENST00000517210 151 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AP000648.1-201ENST00000529682 397 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 MTND2P17-201ENST00000550281 688 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AC079600.1-201ENST00000550326 297 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AC010198.2-201ENST00000550612 259 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AC093249.4-201ENST00000564755 259 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 RN7SL66P-201ENST00000582099 264 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 MRO-208ENST00000588444 866 ntTSL 3 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AC011492.1-201ENST00000600023 315 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AC000068.2-201ENST00000608816 460 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 MIR7702-201ENST00000621931 59 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AC008785.1-201ENST00000624475 456 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 TEX41-256ENST00000626411 368 ntTSL 5 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 METTL15-211ENST00000634762 718 ntTSL 5 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 DCAF13P1-201ENST00000495256 1330 ntBASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.33□□□□□ -2.04
CHKB-CPT1BH3BT56 AC139769.1-204ENST00000472297 1931 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AC090181.3-201ENST00000624777 1514 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms