Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC016717.3-201ENST00000624730 554 ntBASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AL355852.1-201ENST00000454081 1771 ntBASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AC125257.1-201ENST00000560400 2930 ntBASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 AC026951.1-201ENST00000559530 2459 ntBASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 OR4K17-201ENST00000315543 1032 ntBASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 RNU6-1251P-201ENST00000364502 107 ntBASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 SNORA27.3-201ENST00000364937 134 ntBASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 AL450263.2-201ENST00000439400 589 ntBASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 MRPL48P1-201ENST00000445390 636 ntBASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 FTH1P2-201ENST00000466086 412 ntBASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 OR8G5-201ENST00000524943 1041 ntBASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 AP000827.1-201ENST00000527814 258 ntBASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 AC136624.4-201ENST00000573044 370 ntBASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 SS18L2P2-201ENST00000583960 235 ntBASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 AC005520.3-201ENST00000602874 370 ntBASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 AC074276.2-201ENST00000619891 348 ntBASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 AP001005.3-201ENST00000622049 129 ntBASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 AL163152.1-201ENST00000642001 374 ntBASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 MTND4P21-201ENST00000453886 1357 ntBASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
NEDD8-MDP1E9PL57 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 CASC19-204ENST00000641001 2055 ntBASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 AC006971.1-201ENST00000407916 4486 ntBASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 SNORA79B-201ENST00000410557 148 ntBASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 NMNAT1P2-201ENST00000435192 860 ntBASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 MTND5P8-201ENST00000449817 1083 ntBASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 PPIAP21-201ENST00000464473 501 ntBASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 AC010618.1-201ENST00000469924 477 ntBASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 AC103987.1-201ENST00000473394 348 ntBASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 RN7SL810P-201ENST00000493031 276 ntBASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 AC010476.1-201ENST00000519111 851 ntBASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 FAM106CP-201ENST00000582212 507 ntBASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 MIR3939-201ENST00000582614 106 ntBASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 AP001160.4-201ENST00000596971 382 ntBASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 MIMT1-201ENST00000597105 1050 ntBASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 ARF4P1-201ENST00000605447 541 ntBASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 AL162574.2-201ENST00000614618 657 ntBASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 AL158062.1-201ENST00000619632 745 ntBASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 AC006065.6-201ENST00000625201 545 ntBASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 OR2L1P-202ENST00000641567 1023 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms