Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 RPL7AP10-201ENST00000481016 791 ntBASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AC124293.1-201ENST00000530034 493 ntBASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AP002812.4-201ENST00000532139 286 ntBASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 YWHABP2-201ENST00000540201 713 ntBASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AL442163.2-201ENST00000553912 710 ntBASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AC021171.1-201ENST00000603137 706 ntBASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AC009597.2-201ENST00000604659 592 ntBASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AC092106.3-201ENST00000611308 722 ntBASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AC009090.3-201ENST00000616553 565 ntBASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 VN1R7P-201ENST00000619242 903 ntBASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 MTND4P4-201ENST00000439033 1366 ntBASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 MTCO1P6-201ENST00000481192 1384 ntBASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 Y_RNA.505-201ENST00000384489 102 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 ADAM24P-201ENST00000398655 2101 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 AL031779.1-201ENST00000415663 330 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 RPF2P1-201ENST00000424137 906 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 MTCO3P30-201ENST00000426425 670 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 RAC1P8-201ENST00000427086 527 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 AC104837.2-201ENST00000427236 424 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 UBE2V1P1-201ENST00000430836 445 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 CDY14P-201ENST00000431260 1014 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 PTENP1-201ENST00000447117 1215 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 AC005002.1-201ENST00000447458 540 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 CDY23P-201ENST00000451661 1014 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 NPM1P13-201ENST00000452663 865 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 CBX1P2-201ENST00000453841 458 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 RPL12P39-201ENST00000455456 496 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 AC092754.1-201ENST00000472975 479 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 AC091959.2-201ENST00000477363 321 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 AC034244.1-201ENST00000507687 207 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 OR5AZ1P-201ENST00000527448 943 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 EDDM3DP-201ENST00000554692 434 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 AC090695.1-201ENST00000561269 1222 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.1□□□□□ -1.59
CCDC187A0A096LP49 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms