Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 RNA5SP507-201ENST00000363603 121 ntBASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 SNORA51.12-201ENST00000384448 134 ntBASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 MIR223-201ENST00000385204 110 ntBASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 U3.28-201ENST00000391249 210 ntBASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 PAICSP7-201ENST00000419829 962 ntBASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 AL133173.1-201ENST00000423458 397 ntBASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 AC005345.1-201ENST00000431868 217 ntBASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 RPL12P3-201ENST00000440080 396 ntBASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 AC092809.1-201ENST00000441469 474 ntBASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 MTCO2P25-201ENST00000447065 681 ntBASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 RN7SL583P-201ENST00000475692 287 ntBASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 RPS3AP43-201ENST00000479743 781 ntBASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 VPS26AP1-201ENST00000483197 979 ntBASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 LINC00888-204ENST00000487386 421 ntBASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 NRBF2P4-201ENST00000520874 850 ntBASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 NBR2-204ENST00000587322 63 ntBASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 AC012557.2-201ENST00000605919 418 ntBASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 AC025574.2-201ENST00000615621 514 ntBASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 AL355852.1-201ENST00000454081 1771 ntBASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 SGO1P2-201ENST00000429458 1589 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AC007938.2-201ENST00000604666 2634 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 RNA5SP319-201ENST00000362768 119 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 MIR551A-201ENST00000385042 96 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 TAF9BP1-201ENST00000396646 746 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 RN7SKP182-201ENST00000410772 298 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 RN7SKP273-201ENST00000411392 314 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 RPL23AP27-201ENST00000415161 451 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 LUZP4P1-201ENST00000415420 344 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 USP9YP26-201ENST00000421008 661 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AC007161.1-204ENST00000423039 460 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 RPL7P56-201ENST00000429441 717 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 RPL7L1P9-201ENST00000431298 745 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 MTCYBP34-201ENST00000439552 670 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AZGP1P2-201ENST00000454506 345 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AL109741.2-201ENST00000455561 343 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AL161747.1-201ENST00000480068 358 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AC108734.3-201ENST00000481241 1165 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AC004453.1-201ENST00000487895 408 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AC073358.1-201ENST00000505671 684 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 IGBP1P5-201ENST00000507524 1000 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 HMGB1P23-201ENST00000518743 568 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AC138832.1-201ENST00000522871 556 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AL358913.1-201ENST00000554342 121 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AC090751.1-201ENST00000566966 267 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms