Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 AP000542.2-201ENST00000623199 6179 ntBASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 RNU4-92P-201ENST00000363783 136 ntBASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 SNORD116-4-201ENST00000384733 96 ntBASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 MIR550A3-201ENST00000390735 95 ntBASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 Y_RNA.578-201ENST00000390903 88 ntBASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 U3.28-201ENST00000391249 210 ntBASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 QRSL1P2-201ENST00000418582 964 ntBASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 PNRC2P1-201ENST00000423940 420 ntBASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 MTCO3P30-201ENST00000426425 670 ntBASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 AC005345.1-201ENST00000431868 217 ntBASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 PTENP1-201ENST00000447117 1215 ntBASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 CYCSP42-201ENST00000450823 238 ntBASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 COX6B1P2-201ENST00000489624 230 ntBASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 AC231760.1-201ENST00000498002 260 ntBASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 AL671862.1-201ENST00000515851 349 ntBASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 AC018638.7-201ENST00000605836 1114 ntBASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 EIF3FP1-201ENST00000613970 806 ntBASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 AC068792.1-201ENST00000621354 417 ntBASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 AC093591.2-201ENST00000565254 3843 ntBASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CTDP1Q9Y5B0 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AL603750.1-201ENST00000624216 1717 ntBASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AC010329.2-201ENST00000595195 2737 ntBASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 HSPA8P14-201ENST00000552265 1805 ntBASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AC007342.7-201ENST00000624610 2337 ntBASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 MTND4P22-201ENST00000413116 1169 ntBASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AL121878.1-201ENST00000418638 859 ntBASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AL589823.1-201ENST00000429577 183 ntBASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AP000936.3-201ENST00000438127 255 ntBASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 ARL4AP3-201ENST00000441452 574 ntBASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 EXTL2P1-201ENST00000446218 416 ntBASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 LAMTOR3P2-201ENST00000504479 232 ntBASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 RN7SKP147-201ENST00000517154 244 ntBASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AC013701.1-201ENST00000522657 465 ntBASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AC109635.6-201ENST00000525487 1113 ntBASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 OR8I1P-201ENST00000529291 931 ntBASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 OR8G3P-201ENST00000533406 921 ntBASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AL049830.4-201ENST00000555149 351 ntBASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AC019322.1-201ENST00000571869 389 ntBASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 MRPS35P3-201ENST00000603189 709 ntBASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AC010975.3-201ENST00000618727 978 ntBASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AC139713.2-210ENST00000641741 992 ntBASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms