Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AL391987.1-201ENST00000441025 200 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 RPL23AP76-201ENST00000441860 458 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 MTND1P16-201ENST00000465177 898 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 DEFB109A-201ENST00000482450 265 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 RPS3AP14-201ENST00000483907 780 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 SETP14-201ENST00000497538 873 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 NIFKP7-201ENST00000503365 834 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 MTND6P2-201ENST00000512226 524 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 RNA5SP418-201ENST00000515951 117 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 AL049830.4-201ENST00000555149 351 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 AL121579.2-201ENST00000555466 590 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 CYCSP38-201ENST00000559840 322 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 AC093524.1-201ENST00000564266 1094 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 MIR4701-201ENST00000583094 63 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 AC008638.3-201ENST00000603341 463 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 AL713866.2-201ENST00000603579 219 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 AL161729.4-201ENST00000604650 476 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 IGKV2OR2-10-201ENST00000613976 311 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 AL121890.2-201ENST00000617644 465 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 AP001264.1-201ENST00000620602 703 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 DRG1-207ENST00000629688 309 ntTSL 5 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 LYARP1-201ENST00000436977 1501 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 EFTUD1P2-201ENST00000514817 1603 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AL449283.1-201ENST00000602631 3403 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AC078880.4-201ENST00000617627 1749 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AL669831.5-218ENST00000591702 1873 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 RPS26P38-201ENST00000414476 348 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 CYCSP52-201ENST00000422857 310 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AL451074.3-201ENST00000437709 472 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 RPS24P13-201ENST00000442520 397 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 MRPL50P4-201ENST00000446432 475 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AL627224.1-201ENST00000448334 444 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AC104634.1-201ENST00000452720 462 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 GTF2IP12-201ENST00000456547 356 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AC087312.1-201ENST00000471411 480 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 FTH1P8-201ENST00000498161 514 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AC093809.1-201ENST00000509155 340 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AC008837.2-201ENST00000513076 418 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 RNU6-1170P-201ENST00000515974 106 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 OR4C2P-201ENST00000530855 1064 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AC036111.2-201ENST00000533247 901 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 SUGT1P3-202ENST00000604259 383 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AC007363.1-201ENST00000604736 620 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 MIR6085-201ENST00000618314 110 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AC136475.10-201ENST00000620253 385 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AP003400.3-201ENST00000624904 346 ntBASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms