Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 AC010149.2-201ENST00000637608 315 ntBASIC1.73□□□□□ -2.13
MACF1Q9UPN3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 USP31-201ENST00000219689 10699 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 COL12A1-207ENST00000483888 9637 ntAPPRIS ALT1 TSL 5 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 PABPC1P8-201ENST00000452851 2086 ntBASIC1.73□□□□□ -2.13
MACF1Q9UPN3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 AL583835.1-201ENST00000399570 407 ntBASIC1.73□□□□□ -2.13
MACF1Q9UPN3 RPL6P29-201ENST00000414863 865 ntBASIC1.73□□□□□ -2.13
MACF1Q9UPN3 TRIM60P17-201ENST00000415181 719 ntBASIC1.73□□□□□ -2.13
MACF1Q9UPN3 CYCSP4-201ENST00000429682 331 ntBASIC1.73□□□□□ -2.13
MACF1Q9UPN3 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 SCARNA14-201ENST00000516903 136 ntBASIC1.73□□□□□ -2.13
MACF1Q9UPN3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 AC107993.1-201ENST00000591343 684 ntBASIC1.73□□□□□ -2.13
MACF1Q9UPN3 AL354984.3-201ENST00000604803 325 ntBASIC1.73□□□□□ -2.13
MACF1Q9UPN3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 CLVS2-201ENST00000275162 11485 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 DPY19L1P2-201ENST00000426647 915 ntBASIC1.73□□□□□ -2.13
MACF1Q9UPN3 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 OR4K7P-201ENST00000580232 945 ntBASIC1.73□□□□□ -2.13
MACF1Q9UPN3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 DMD-202ENST00000343523 5623 ntTSL 5 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 ACEA_U3.1-201ENST00000363057 217 ntBASIC1.73□□□□□ -2.13
MACF1Q9UPN3 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 RN7SL432P-201ENST00000484057 298 ntBASIC1.73□□□□□ -2.13
MACF1Q9UPN3 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC1.73□□□□□ -2.13
MACF1Q9UPN3 AC006539.2-201ENST00000601729 572 ntBASIC1.73□□□□□ -2.13
MACF1Q9UPN3 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 AC009643.2-201ENST00000603543 1448 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 AC005831.1-201ENST00000624384 1697 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 U3.28-201ENST00000391249 210 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 AL590399.2-201ENST00000427536 309 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 WASF1P1-201ENST00000447560 1131 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 KCTD9P4-201ENST00000526766 1166 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 AC020914.6-201ENST00000594327 272 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 AC138932.5-201ENST00000617759 563 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 RNA5SP325-201ENST00000363756 130 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 RNA5SP235-201ENST00000365411 114 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 SEPT7P2-202ENST00000398921 823 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 AC096644.3-201ENST00000416788 338 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 CYCSP53-201ENST00000455540 265 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 AC091516.1-201ENST00000549191 703 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms