Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AL139022.2-201ENST00000606934 443 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 OR7A19P-201ENST00000608051 733 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AL158062.1-201ENST00000619632 745 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 THAP12P4-201ENST00000528321 2266 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 RNU6-1251P-201ENST00000364502 107 ntBASIC4.45□□□□□ -1.7
NDE1Q9NXR1 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 DUTP5-201ENST00000406790 469 ntBASIC4.45□□□□□ -1.7
NDE1Q9NXR1 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 GTF2IP5-201ENST00000414608 731 ntBASIC4.45□□□□□ -1.7
NDE1Q9NXR1 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 BX119904.1-201ENST00000432026 348 ntBASIC4.45□□□□□ -1.7
NDE1Q9NXR1 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 RPL34P20-201ENST00000442771 351 ntBASIC4.45□□□□□ -1.7
NDE1Q9NXR1 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 AL163193.1-201ENST00000444895 788 ntBASIC4.45□□□□□ -1.7
NDE1Q9NXR1 AC092647.2-201ENST00000452998 253 ntBASIC4.45□□□□□ -1.7
NDE1Q9NXR1 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 AL121877.1-201ENST00000453704 622 ntBASIC4.45□□□□□ -1.7
NDE1Q9NXR1 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 AC092905.1-201ENST00000467527 949 ntBASIC4.45□□□□□ -1.7
NDE1Q9NXR1 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 AC098799.3-201ENST00000506095 438 ntBASIC4.45□□□□□ -1.7
NDE1Q9NXR1 HNRNPKP5-201ENST00000515300 253 ntBASIC4.45□□□□□ -1.7
NDE1Q9NXR1 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 OR10G5P-201ENST00000532733 358 ntBASIC4.45□□□□□ -1.7
NDE1Q9NXR1 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 MIR5699-201ENST00000578903 90 ntBASIC4.45□□□□□ -1.7
NDE1Q9NXR1 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 ABI1P1-201ENST00000603375 1120 ntBASIC4.45□□□□□ -1.7
NDE1Q9NXR1 AC119501.1-201ENST00000603646 475 ntBASIC4.45□□□□□ -1.7
NDE1Q9NXR1 RNA5SP440-201ENST00000612665 119 ntBASIC4.45□□□□□ -1.7
NDE1Q9NXR1 RMST_9.1-201ENST00000619945 193 ntBASIC4.45□□□□□ -1.7
NDE1Q9NXR1 AC136428.4-201ENST00000634254 1155 ntBASIC4.45□□□□□ -1.7
NDE1Q9NXR1 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 AC099654.2-201ENST00000433031 1980 ntBASIC4.45□□□□□ -1.7
NDE1Q9NXR1 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NDE1Q9NXR1 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 ASNSP1-201ENST00000518311 1939 ntBASIC4.44□□□□□ -1.7
NDE1Q9NXR1 AC097504.1-201ENST00000515103 2415 ntBASIC4.44□□□□□ -1.7
NDE1Q9NXR1 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 RNA5SP510-201ENST00000364697 99 ntBASIC4.44□□□□□ -1.7
NDE1Q9NXR1 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 HMGB3P7-201ENST00000400214 611 ntBASIC4.44□□□□□ -1.7
NDE1Q9NXR1 AL354692.1-201ENST00000423044 315 ntBASIC4.44□□□□□ -1.7
NDE1Q9NXR1 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 RNF2P1-201ENST00000442955 1010 ntBASIC4.44□□□□□ -1.7
NDE1Q9NXR1 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 PPM1AP1-201ENST00000502740 1135 ntBASIC4.44□□□□□ -1.7
NDE1Q9NXR1 AC016550.1-201ENST00000505348 785 ntBASIC4.44□□□□□ -1.7
NDE1Q9NXR1 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 PARP4P3-201ENST00000510265 317 ntBASIC4.44□□□□□ -1.7
NDE1Q9NXR1 AC093770.1-201ENST00000511559 571 ntBASIC4.44□□□□□ -1.7
NDE1Q9NXR1 AC010374.2-201ENST00000512933 535 ntBASIC4.44□□□□□ -1.7
NDE1Q9NXR1 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 AC113192.3-201ENST00000529152 742 ntBASIC4.44□□□□□ -1.7
NDE1Q9NXR1 AP001804.2-201ENST00000533932 910 ntBASIC4.44□□□□□ -1.7
NDE1Q9NXR1 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms