Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 MRPS33P2-201ENST00000507850 322 ntBASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 PARP4P3-201ENST00000510265 317 ntBASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 HMGB3P13-201ENST00000511263 607 ntBASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 AP000676.2-201ENST00000529711 301 ntBASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 MTCO2P22-201ENST00000603246 681 ntBASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 AL022401.1-201ENST00000619498 108 ntBASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 AC091905.2-201ENST00000623143 306 ntBASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 CR381572.2-201ENST00000624852 397 ntBASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 AC007390.2-201ENST00000606229 3803 ntBASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.24□□□□□ -1.73
CCNB1IP1Q9NPC3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 SAMMSON-226ENST00000642089 1582 ntBASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 FCF1P5-201ENST00000406490 482 ntBASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 RN7SKP278-201ENST00000410504 342 ntBASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 CASKP1-201ENST00000412870 582 ntBASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 NANOGP6-201ENST00000429190 847 ntBASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 PTMAP6-201ENST00000439110 327 ntBASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 OR1H1P-201ENST00000448731 937 ntBASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 RPL23AP56-201ENST00000460778 453 ntBASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 AC021205.1-201ENST00000468797 348 ntBASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 AC133555.2-201ENST00000550213 292 ntBASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 AC084033.1-201ENST00000550830 633 ntBASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 AL139395.1-201ENST00000603662 160 ntBASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 AC131971.1-201ENST00000332881 1482 ntBASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCNB1IP1Q9NPC3 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 MIR708-201ENST00000390708 88 ntBASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 AL078604.1-201ENST00000404609 466 ntBASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 COX6B1P1-201ENST00000415962 213 ntBASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 AC062016.2-201ENST00000420950 676 ntBASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 HLA-N-201ENST00000437516 135 ntBASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 RN7SL329P-201ENST00000467740 299 ntBASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 BTF3P13-201ENST00000513224 490 ntBASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 RNU1-6P-201ENST00000516290 144 ntBASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 AC008033.2-201ENST00000542626 177 ntBASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 PCNPP1-201ENST00000552501 511 ntBASIC4.22□□□□□ -1.73
CCNB1IP1Q9NPC3 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms