Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC11.72□□□□□ -0.53
SCAF1Q9H7N4 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SCAF1Q9H7N4 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
SCAF1Q9H7N4 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
SCAF1Q9H7N4 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCAF1Q9H7N4 CYP4A11-204ENST00000462347 1775 ntTSL 5 BASIC11.72□□□□□ -0.53
SCAF1Q9H7N4 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SCAF1Q9H7N4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 ADAM2-205ENST00000521880 2125 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 AL161912.4-201ENST00000623889 2468 ntBASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 AC093311.1-201ENST00000506586 2021 ntBASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 RPL24P4-201ENST00000326586 421 ntBASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 SNORD3J-201ENST00000408473 190 ntBASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 RNU6-1156P-201ENST00000410365 100 ntBASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 RN7SKP119-201ENST00000410753 273 ntBASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 MED13P1-201ENST00000428342 171 ntBASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 SNX18P14-201ENST00000429308 574 ntBASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 AC108039.2-201ENST00000440214 359 ntBASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 AC109454.1-201ENST00000471205 498 ntBASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 AC112203.1-201ENST00000506315 1020 ntBASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 PDCD5P2-201ENST00000507570 312 ntBASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 RNU6-1332P-201ENST00000516666 104 ntBASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 AL359219.2-201ENST00000555184 348 ntBASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 MIR8089-201ENST00000620165 82 ntBASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 AP003471.1-202ENST00000319051 1988 ntBASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 DHX40P1-201ENST00000588725 1412 ntBASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 PARP1P1-201ENST00000413631 3026 ntBASIC11.71□□□□□ -0.53
SCAF1Q9H7N4 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
SCAF1Q9H7N4 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
SCAF1Q9H7N4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
SCAF1Q9H7N4 LINC00662-203ENST00000586954 2254 ntTSL 2 BASIC11.71□□□□□ -0.54
SCAF1Q9H7N4 PRO1804-201ENST00000623780 2050 ntBASIC11.71□□□□□ -0.54
SCAF1Q9H7N4 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SCAF1Q9H7N4 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 Y_RNA.471-201ENST00000384312 102 ntBASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 MIR621-201ENST00000384919 96 ntBASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 PRELID1P2-201ENST00000407805 396 ntBASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 AL138899.2-201ENST00000439139 499 ntBASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 AL445466.1-201ENST00000448432 357 ntBASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 RPL23AP41-201ENST00000484754 458 ntBASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 AC015909.4-201ENST00000577175 578 ntTSL 4 BASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 RPS27AP19-201ENST00000597285 458 ntBASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 AL390123.1-201ENST00000603216 237 ntBASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 RPL23AP90-201ENST00000603820 236 ntBASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 AC008162.1-201ENST00000604718 254 ntBASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 AL670379.4-201ENST00000605279 254 ntBASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 PAH-201ENST00000307000 2466 ntTSL 5 BASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 CCT8P1-201ENST00000413611 1657 ntBASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC11.7□□□□□ -0.54
SCAF1Q9H7N4 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
SCAF1Q9H7N4 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SCAF1Q9H7N4 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SCAF1Q9H7N4 STXBP5-AS1-209ENST00000606831 2025 ntTSL 5 BASIC11.69□□□□□ -0.54
SCAF1Q9H7N4 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
SCAF1Q9H7N4 HAUS6P2-201ENST00000433254 2404 ntBASIC11.69□□□□□ -0.54
SCAF1Q9H7N4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SCAF1Q9H7N4 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC11.69□□□□□ -0.54
SCAF1Q9H7N4 Y_RNA.183-201ENST00000363882 113 ntBASIC11.69□□□□□ -0.54
SCAF1Q9H7N4 RNU6-47P-201ENST00000383866 107 ntBASIC11.69□□□□□ -0.54
SCAF1Q9H7N4 SNORA51.7-201ENST00000384171 134 ntBASIC11.69□□□□□ -0.54
SCAF1Q9H7N4 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
SCAF1Q9H7N4 RNU6-394P-201ENST00000410735 107 ntBASIC11.69□□□□□ -0.54
SCAF1Q9H7N4 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC11.69□□□□□ -0.54
SCAF1Q9H7N4 BMS1P22-201ENST00000414726 313 ntBASIC11.69□□□□□ -0.54
SCAF1Q9H7N4 AL513302.1-201ENST00000415679 428 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms