Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC017002.4-201ENST00000604721 1525 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 RNA5SP326-201ENST00000363209 110 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AL590084.2-201ENST00000401481 382 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 RN7SKP59-201ENST00000410520 314 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 MTCO1P17-201ENST00000411522 491 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 PGBD4P8-201ENST00000412993 562 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 C1DP1-201ENST00000426049 402 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 RPS11P7-201ENST00000442125 465 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AC073072.2-201ENST00000447425 348 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 EPS15P1-201ENST00000448836 336 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AL672138.1-201ENST00000450604 1015 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 MTCO3P38-201ENST00000468910 766 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 LINC00888-204ENST00000487386 421 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AC109458.1-201ENST00000508858 316 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AC079140.3-201ENST00000511111 550 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 SCARNA16.4-201ENST00000516956 187 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AC090695.1-201ENST00000561269 1222 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AP001269.3-201ENST00000588718 329 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AP002884.5-201ENST00000595053 1132 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 VN1R81P-201ENST00000602085 372 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AC079089.3-201ENST00000603094 673 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AC005377.1-201ENST00000605126 456 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AC009237.15-201ENST00000610252 501 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 OR8G7P-201ENST00000616658 848 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AC005840.5-201ENST00000619166 599 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 MAPK10-338ENST00000641647 3362 ntBASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AC112255.1-201ENST00000624070 2493 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AC125336.1-201ENST00000508893 2827 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 RNU6-252P-201ENST00000363232 107 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 RNU5A-2P-201ENST00000384337 116 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 MT-TH-201ENST00000387441 69 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 RPL7P27-201ENST00000403775 720 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 RN7SKP17-201ENST00000411242 351 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AP000534.2-201ENST00000412729 568 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AL354766.1-201ENST00000423396 542 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AC104651.1-201ENST00000427559 735 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms