Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC073091.2-201ENST00000603205 907 ntBASIC4.57□□□□□ -1.68
C9orf72Q96LT7 AL023583.1-201ENST00000607518 1143 ntBASIC4.57□□□□□ -1.68
C9orf72Q96LT7 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.57□□□□□ -1.68
C9orf72Q96LT7 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
C9orf72Q96LT7 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
C9orf72Q96LT7 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.57□□□□□ -1.68
C9orf72Q96LT7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
C9orf72Q96LT7 MAPK10-304ENST00000641341 3984 ntBASIC4.57□□□□□ -1.68
C9orf72Q96LT7 AL132640.2-201ENST00000559968 1698 ntBASIC4.57□□□□□ -1.68
C9orf72Q96LT7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
C9orf72Q96LT7 AC108467.2-201ENST00000617640 1597 ntBASIC4.57□□□□□ -1.68
C9orf72Q96LT7 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.57□□□□□ -1.68
C9orf72Q96LT7 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 AC021146.4-201ENST00000309229 279 ntBASIC4.56□□□□□ -1.68
C9orf72Q96LT7 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 RNU1-15P-201ENST00000353977 144 ntBASIC4.56□□□□□ -1.68
C9orf72Q96LT7 SNORD113.2-201ENST00000364166 89 ntBASIC4.56□□□□□ -1.68
C9orf72Q96LT7 AL512430.2-201ENST00000406786 339 ntBASIC4.56□□□□□ -1.68
C9orf72Q96LT7 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 OR2X1P-201ENST00000421144 687 ntBASIC4.56□□□□□ -1.68
C9orf72Q96LT7 AC009480.2-201ENST00000422916 432 ntBASIC4.56□□□□□ -1.68
C9orf72Q96LT7 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 RPEP2-201ENST00000432149 701 ntBASIC4.56□□□□□ -1.68
C9orf72Q96LT7 HLA-N-201ENST00000437516 135 ntBASIC4.56□□□□□ -1.68
C9orf72Q96LT7 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 RN7SL809P-201ENST00000482040 297 ntBASIC4.56□□□□□ -1.68
C9orf72Q96LT7 AK3P4-201ENST00000504283 583 ntBASIC4.56□□□□□ -1.68
C9orf72Q96LT7 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 AC015795.1-201ENST00000513669 327 ntBASIC4.56□□□□□ -1.68
C9orf72Q96LT7 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.56□□□□□ -1.68
C9orf72Q96LT7 RNU4-18P-201ENST00000516751 149 ntBASIC4.56□□□□□ -1.68
C9orf72Q96LT7 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 AP005119.2-201ENST00000579735 1105 ntBASIC4.56□□□□□ -1.68
C9orf72Q96LT7 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 AC020915.5-201ENST00000596836 964 ntBASIC4.56□□□□□ -1.68
C9orf72Q96LT7 BPIFA4P-203ENST00000603168 689 ntBASIC4.56□□□□□ -1.68
C9orf72Q96LT7 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 AC004241.3-201ENST00000611728 517 ntBASIC4.56□□□□□ -1.68
C9orf72Q96LT7 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 AC007546.2-201ENST00000623996 360 ntBASIC4.56□□□□□ -1.68
C9orf72Q96LT7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 KARSP3-201ENST00000571212 1504 ntBASIC4.56□□□□□ -1.68
C9orf72Q96LT7 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
C9orf72Q96LT7 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.55□□□□□ -1.68
C9orf72Q96LT7 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
C9orf72Q96LT7 RNA5SP307-201ENST00000362863 116 ntBASIC4.55□□□□□ -1.68
C9orf72Q96LT7 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
C9orf72Q96LT7 RNA5SP397-201ENST00000391323 118 ntBASIC4.55□□□□□ -1.68
C9orf72Q96LT7 AC104297.1-201ENST00000393779 870 ntBASIC4.55□□□□□ -1.68
C9orf72Q96LT7 UBTFL3-201ENST00000418934 1024 ntBASIC4.55□□□□□ -1.68
C9orf72Q96LT7 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.55□□□□□ -1.68
C9orf72Q96LT7 CNOT7P1-201ENST00000429006 852 ntBASIC4.55□□□□□ -1.68
C9orf72Q96LT7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.55□□□□□ -1.68
C9orf72Q96LT7 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.55□□□□□ -1.68
C9orf72Q96LT7 CYCSP42-201ENST00000450823 238 ntBASIC4.55□□□□□ -1.68
C9orf72Q96LT7 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.55□□□□□ -1.68
C9orf72Q96LT7 OR52A4P-201ENST00000472867 958 ntBASIC4.55□□□□□ -1.68
C9orf72Q96LT7 UBTFL6-201ENST00000477929 1024 ntBASIC4.55□□□□□ -1.68
C9orf72Q96LT7 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.55□□□□□ -1.68
C9orf72Q96LT7 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.55□□□□□ -1.68
C9orf72Q96LT7 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.55□□□□□ -1.68
C9orf72Q96LT7 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.55□□□□□ -1.68
C9orf72Q96LT7 SULT1C2P2-201ENST00000562517 294 ntBASIC4.55□□□□□ -1.68
C9orf72Q96LT7 MTND2P13-201ENST00000577438 1039 ntBASIC4.55□□□□□ -1.68
C9orf72Q96LT7 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.55□□□□□ -1.68
C9orf72Q96LT7 AC093765.1-201ENST00000603758 881 ntBASIC4.55□□□□□ -1.68
C9orf72Q96LT7 Z98200.1-201ENST00000607298 470 ntBASIC4.55□□□□□ -1.68
C9orf72Q96LT7 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.55□□□□□ -1.68
C9orf72Q96LT7 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms