Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC069222.1-201ENST00000608028 3360 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.66□□□□□ -1.18
LRCH3Q96II8 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LRCH3Q96II8 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LRCH3Q96II8 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.66□□□□□ -1.18
LRCH3Q96II8 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LRCH3Q96II8 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
LRCH3Q96II8 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.66□□□□□ -1.18
LRCH3Q96II8 AC124045.1-201ENST00000606008 1953 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LRCH3Q96II8 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC7.66□□□□□ -1.18
LRCH3Q96II8 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LRCH3Q96II8 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
LRCH3Q96II8 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC7.66□□□□□ -1.18
LRCH3Q96II8 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.66□□□□□ -1.18
LRCH3Q96II8 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LRCH3Q96II8 RNU6-730P-201ENST00000383954 104 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 Y_RNA.555-201ENST00000384673 110 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 AL031985.1-201ENST00000392713 418 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 AL590143.1-201ENST00000405071 138 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 OR6E1P-201ENST00000414424 923 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 MTCO3P19-201ENST00000415864 321 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC7.66□□□□□ -1.18
LRCH3Q96II8 HMGB1P9-201ENST00000429856 646 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 AC093716.1-201ENST00000435923 377 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 GAPDHP48-201ENST00000436626 961 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 MGAT2P1-201ENST00000449718 797 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC7.66□□□□□ -1.18
LRCH3Q96II8 AC090142.1-201ENST00000465776 462 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 AC005550.2-201ENST00000476382 318 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC7.66□□□□□ -1.18
LRCH3Q96II8 AC010350.1-201ENST00000504908 231 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 AC008638.1-201ENST00000506035 866 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC7.66□□□□□ -1.18
LRCH3Q96II8 Y_RNA.661-201ENST00000516003 99 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 RNU4ATAC8P-201ENST00000516196 109 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 IGLC4-201ENST00000517690 248 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC7.66□□□□□ -1.18
LRCH3Q96II8 AC023157.2-201ENST00000540596 141 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC7.66□□□□□ -1.18
LRCH3Q96II8 AC093519.1-201ENST00000566109 298 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 MIR4790-201ENST00000577799 79 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC7.66□□□□□ -1.18
LRCH3Q96II8 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC7.66□□□□□ -1.18
LRCH3Q96II8 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.66□□□□□ -1.18
LRCH3Q96II8 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.66□□□□□ -1.18
LRCH3Q96II8 AC104184.1-201ENST00000607513 721 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 AC096772.1-201ENST00000609146 564 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 ATM-230ENST00000640388 578 ntTSL 5 BASIC7.66□□□□□ -1.18
LRCH3Q96II8 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7.66□□□□□ -1.18
LRCH3Q96II8 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LRCH3Q96II8 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LRCH3Q96II8 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
LRCH3Q96II8 AC020904.2-202ENST00000614660 1401 ntBASIC7.66□□□□□ -1.18
LRCH3Q96II8 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LRCH3Q96II8 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
LRCH3Q96II8 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
LRCH3Q96II8 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LRCH3Q96II8 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
LRCH3Q96II8 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LRCH3Q96II8 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.66□□□□□ -1.18
LRCH3Q96II8 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LRCH3Q96II8 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LRCH3Q96II8 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LRCH3Q96II8 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LRCH3Q96II8 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LRCH3Q96II8 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
LRCH3Q96II8 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.18
LRCH3Q96II8 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LRCH3Q96II8 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LRCH3Q96II8 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
LRCH3Q96II8 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
LRCH3Q96II8 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.18
LRCH3Q96II8 RNA5SP443-201ENST00000363083 132 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 RNA5SP472-201ENST00000363868 119 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 U3.12-201ENST00000364498 214 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 Y_RNA.288-201ENST00000364854 92 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 Y_RNA.515-201ENST00000384535 112 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 RNU6-606P-201ENST00000384721 111 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 Y_RNA.645-201ENST00000391229 102 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.65□□□□□ -1.18
LRCH3Q96II8 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LRCH3Q96II8 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.65□□□□□ -1.18
LRCH3Q96II8 RNU6-954P-201ENST00000411355 107 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 RPS3P2-201ENST00000421346 701 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 AC139712.2-201ENST00000424302 339 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 FTH1P5-201ENST00000425761 545 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.65□□□□□ -1.18
LRCH3Q96II8 OR2AS1P-201ENST00000427827 319 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 AC007365.2-201ENST00000428806 458 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 AL022163.1-201ENST00000430261 1569 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 MTND5P15-201ENST00000434246 349 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC7.65□□□□□ -1.18
LRCH3Q96II8 MTCO3P45-201ENST00000443036 613 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 PRPS1P1-201ENST00000445305 876 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC7.65□□□□□ -1.18
LRCH3Q96II8 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC7.65□□□□□ -1.18
LRCH3Q96II8 AC006512.1-201ENST00000468816 291 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 AC093664.1-201ENST00000511779 289 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms