Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AC100757.1-201ENST00000616872 1835 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 MTCO1P6-201ENST00000481192 1384 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 RNU6-1339P-201ENST00000363574 91 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 MIR1303-201ENST00000408625 86 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 RNU4-22P-201ENST00000411058 166 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 HIGD1AP15-201ENST00000416198 280 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AC048351.1-201ENST00000420064 602 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AC092447.3-201ENST00000426027 686 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 MGAT2P2-201ENST00000427194 797 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AP001324.1-201ENST00000428553 399 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AL161722.2-201ENST00000434731 981 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 MTND1P26-201ENST00000440488 538 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 RPS26P30-201ENST00000443431 335 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AC112498.1-201ENST00000444401 332 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 MTCYBP42-201ENST00000444653 1130 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AL929288.2-201ENST00000446368 407 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 DNAJC19P8-201ENST00000452887 259 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 RPL23AP37-201ENST00000479658 549 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 HMGN1P9-201ENST00000515212 298 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 DEFB130C-202ENST00000530001 230 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AC124293.1-201ENST00000530034 493 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 EIF1P6-201ENST00000600054 334 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AC022022.2-201ENST00000602989 360 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 BNIP3P4-201ENST00000604946 565 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AL139124.1-201ENST00000609123 421 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 MIR378J-201ENST00000611988 109 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 AC009159.2-201ENST00000617603 606 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 U6.48-201ENST00000618523 106 ntBASIC5.18□□□□□ -1.58
HMGB4Q8WW32 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 RNVU1-6-201ENST00000364688 164 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 RN7SKP186-201ENST00000365371 303 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 RNU6-317P-201ENST00000384031 107 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 SNORD116-12-201ENST00000384468 92 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AL590139.1-201ENST00000416267 400 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AC027644.1-201ENST00000419595 298 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 C1DP1-201ENST00000426049 402 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AC092017.2-201ENST00000427600 362 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 RPS24P8-201ENST00000431490 402 ntBASIC5.17□□□□□ -1.58
HMGB4Q8WW32 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB4Q8WW32 RPL21P133-201ENST00000443666 476 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms