Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC008958.1-201ENST00000511047 682 ntBASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 AC090948.2-201ENST00000607363 564 ntBASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 AL138721.1-201ENST00000616756 179 ntBASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.46□□□□□ -1.69
SHROOM3Q8TF72 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.46□□□□□ -1.69
SHROOM3Q8TF72 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SHROOM3Q8TF72 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.46□□□□□ -1.69
SHROOM3Q8TF72 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 MIR331-201ENST00000362302 94 ntBASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 AL078604.1-201ENST00000404609 466 ntBASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 RN7SKP202-201ENST00000410439 330 ntBASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 TBCAP1-201ENST00000436520 327 ntBASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 PRSS3P4-201ENST00000453323 162 ntBASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 RN7SL98P-201ENST00000462271 300 ntBASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 AC100770.1-201ENST00000532310 322 ntBASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 SNORD91B-202ENST00000608459 222 ntBASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 AC023509.5-201ENST00000617434 807 ntBASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 AL357559.1-201ENST00000622228 274 ntBASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 AP001157.1-201ENST00000550837 2339 ntBASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 AC032011.1-201ENST00000611703 1549 ntBASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHROOM3Q8TF72 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 MIR554-201ENST00000384874 96 ntBASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 RPL23AP59-201ENST00000399415 461 ntBASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 SKP1P3-201ENST00000429280 487 ntBASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 RRM2P4-201ENST00000441721 562 ntBASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 PHBP16-201ENST00000446318 950 ntBASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 RPL7P22-201ENST00000466005 733 ntBASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 RN7SL812P-201ENST00000493791 279 ntBASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 AP005119.2-201ENST00000579735 1105 ntBASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 AL035461.2-201ENST00000619201 524 ntBASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 MIR7154-201ENST00000620673 73 ntBASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 AC244100.1-202ENST00000621554 382 ntBASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 AC025031.4-201ENST00000621248 3271 ntBASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 AC097634.1-201ENST00000604491 2467 ntBASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 OR5P1P-201ENST00000299512 925 ntBASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 ATP5F1P2-201ENST00000398143 760 ntBASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 RN7SKP235-201ENST00000410662 305 ntBASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 RPS23P10-201ENST00000416185 486 ntBASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 GOT2P5-201ENST00000433995 546 ntBASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 AC006517.1-201ENST00000480485 328 ntBASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 AL031666.3-201ENST00000609320 1006 ntBASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SHROOM3Q8TF72 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 SEPT7P8-201ENST00000413308 775 ntBASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 UBE2V1P3-201ENST00000439651 417 ntBASIC4.44□□□□□ -1.7
SHROOM3Q8TF72 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms