Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 AC023509.5-201ENST00000617434 807 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 AC068870.2-201ENST00000620635 389 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 MAPK10-263ENST00000641052 4307 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 RNA5SP502-201ENST00000362694 119 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 SNORA71.2-201ENST00000364941 134 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 MT-TP-201ENST00000387461 68 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AL034403.1-201ENST00000399414 885 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AL645733.1-201ENST00000402250 217 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 RN7SKP278-201ENST00000410504 342 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 VDAC1P9-201ENST00000412766 841 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 RPL21P108-201ENST00000413857 481 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AC008072.1-201ENST00000434254 824 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AL627308.1-201ENST00000435693 821 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 RAB28P3-201ENST00000448325 597 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 RPS3AP41-201ENST00000462701 778 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 RN7SL41P-201ENST00000476144 297 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AC010627.1-201ENST00000503819 1294 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AC018797.3-201ENST00000513388 1241 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AC108471.1-201ENST00000513977 287 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 MYL12AP1-201ENST00000518490 515 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 IGLV3-26-201ENST00000520756 302 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 OR5M2P-201ENST00000529003 936 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AC135001.1-201ENST00000544546 283 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AC044860.2-201ENST00000561005 179 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 MIR4646-201ENST00000580775 63 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AC110743.1-201ENST00000584870 478 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AL160290.3-201ENST00000604869 165 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AP002360.3-201ENST00000607673 710 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AC007620.3-201ENST00000608131 497 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AC009452.1-201ENST00000640823 606 ntBASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLHC1Q8NHS4 AC017104.4-201ENST00000636283 1592 ntBASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 ZNF137P-201ENST00000456718 1920 ntBASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 RNU1-44P-201ENST00000384453 163 ntBASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 AC104837.2-201ENST00000427236 424 ntBASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 BRWD1P3-201ENST00000428816 390 ntBASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 RPL23AP25-201ENST00000430973 463 ntBASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 RPL23AP93-201ENST00000440847 484 ntBASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 AC239809.1-201ENST00000450470 217 ntBASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 RPS3AP53-201ENST00000454716 778 ntBASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 AC012158.1-204ENST00000483430 465 ntBASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 AC008638.1-201ENST00000506035 866 ntBASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 AC051619.2-201ENST00000559063 397 ntBASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 MIR3934-201ENST00000579806 107 ntBASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms