Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 SEC63P2-201ENST00000503863 1939 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AC017079.1-201ENST00000333650 415 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 RNU6-236P-201ENST00000363886 106 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AL603865.2-201ENST00000401679 213 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 RPL7P27-201ENST00000403775 720 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AP002530.1-201ENST00000405705 684 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 HMGB3P18-201ENST00000406327 590 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 PCNPP4-201ENST00000414817 517 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 USP9YP21-201ENST00000420603 432 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AL360081.1-201ENST00000428299 555 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AL049745.1-201ENST00000433953 286 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AL137845.2-201ENST00000444292 988 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 PRPF38AP1-201ENST00000451976 933 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 RPL7P16-201ENST00000479738 738 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 RNA5SP43-201ENST00000516559 110 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 HMGB1P1-201ENST00000522557 636 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 MORF4L1P3-201ENST00000525966 950 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AC008033.2-201ENST00000542626 177 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 NMNAT1P1-201ENST00000554095 876 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 ATP5F1P7-201ENST00000567330 760 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 MIR4675-201ENST00000577898 77 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 MTCYBP13-201ENST00000578634 1093 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 BNIP3P38-201ENST00000601117 544 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AC090525.3-201ENST00000605601 189 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AC138907.10-201ENST00000623708 983 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AP003497.2-201ENST00000624220 967 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 AP005432.1-201ENST00000580891 3485 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 NEAT1-202ENST00000501122 22743 ntBASIC4.68□□□□□ -1.66
BEST3Q8N1M1 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 RNU6-225P-201ENST00000384613 103 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 SNORD65C-201ENST00000390962 71 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 Z97832.1-201ENST00000402490 328 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 LINC01881-201ENST00000416103 412 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 BX323845.1-201ENST00000432417 179 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC092170.1-201ENST00000440211 356 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AL354714.3-201ENST00000447284 493 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 OR51B8P-201ENST00000449892 769 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AL009048.1-201ENST00000450437 298 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC092324.1-201ENST00000468671 324 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC020898.1-201ENST00000474167 787 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC104687.1-201ENST00000485829 412 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms