Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC009784.1-201ENST00000426484 460 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 GSTM5P1-201ENST00000434751 660 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 AL354941.1-201ENST00000438600 464 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 ABCC13-202ENST00000463099 3842 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 AC104763.1-201ENST00000475274 360 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 RPS6P4-201ENST00000494693 758 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 DSTNP2-201ENST00000504533 515 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 AC109464.2-201ENST00000510242 943 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 CDC42P4-201ENST00000510507 563 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 NPM1P21-201ENST00000513394 762 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 SERPINE4P-201ENST00000554978 281 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 AC083760.1-201ENST00000589621 670 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 AC108738.1-201ENST00000603703 237 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 MTCYBP22-201ENST00000603788 447 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 AC096553.1-201ENST00000605169 829 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 AC108747.1-201ENST00000609508 535 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 AC010632.3-201ENST00000611377 369 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 AL359314.1-201ENST00000616913 261 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 AC024595.1-201ENST00000623088 387 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VRK3Q8IV63 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VRK3Q8IV63 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VRK3Q8IV63 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 AC004520.1-201ENST00000608362 1413 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
VRK3Q8IV63 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VRK3Q8IV63 SAMM50P1-201ENST00000455403 1399 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VRK3Q8IV63 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VRK3Q8IV63 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VRK3Q8IV63 CASC19-260ENST00000641828 2001 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
VRK3Q8IV63 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
VRK3Q8IV63 RNA5SP335-201ENST00000363817 110 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VRK3Q8IV63 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 DBIP1-201ENST00000401435 260 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 RN7SKP206-201ENST00000410823 293 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 USP9YP33-201ENST00000412220 421 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 OR4K6P-201ENST00000416478 897 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 AC016831.2-201ENST00000417179 352 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 RAC1P8-201ENST00000427086 527 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 TPMTP4-201ENST00000450749 678 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 PSAT1P4-201ENST00000466500 526 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 AC092754.1-201ENST00000472975 479 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 SETP11-201ENST00000473027 690 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 RPL9P33-201ENST00000484311 566 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 AL136038.1-201ENST00000497246 351 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VRK3Q8IV63 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 SCARNA16.4-201ENST00000516956 187 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 MIR4433B-201ENST00000581329 102 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms