Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 Y_RNA.51-201ENST00000362725 102 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 Y_RNA.169-201ENST00000363745 96 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 HMGN1P14-201ENST00000412459 517 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 RSU1P3-201ENST00000412878 835 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 AC013429.2-201ENST00000418798 781 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 MTCO3P4-201ENST00000419236 787 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 RPL7P30-201ENST00000420888 709 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 AC104333.2-201ENST00000422630 192 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 AL049745.1-201ENST00000433953 286 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 CYCSP11-201ENST00000436426 315 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 CCRL1P1-201ENST00000449542 1053 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 AL096803.2-201ENST00000450032 677 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 AL645937.3-201ENST00000453647 936 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 AC091685.2-201ENST00000454924 864 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 AL356390.1-201ENST00000455684 397 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 OR7L1P-201ENST00000456181 380 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 RFPL1S-203ENST00000539579 330 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 CYB5AP5-201ENST00000549779 389 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 EDDM3DP-201ENST00000554692 434 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 AL133241.1-201ENST00000556832 487 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 UBE2FP2-201ENST00000566646 462 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 RN7SL802P-201ENST00000577858 299 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 AL391358.1-201ENST00000605342 190 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 AL121655.1-201ENST00000605811 308 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 BX323046.1-201ENST00000610145 535 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 AC021755.4-201ENST00000616620 456 ntBASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
BHLHA9Q7RTU4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 ICE2P1-201ENST00000512800 1849 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 RN7SKP186-201ENST00000365371 303 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 AP002784.2-201ENST00000397300 549 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 OR51B3P-201ENST00000412287 913 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 AC007738.1-201ENST00000413892 348 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 VTI1BP4-201ENST00000427516 527 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 USP9YP11-201ENST00000427537 717 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 Z80107.2-201ENST00000445127 392 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 RPS15AP29-201ENST00000445539 400 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 SNORD11.1-201ENST00000459482 85 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 AC025181.1-201ENST00000477507 416 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 RN7SL558P-201ENST00000497468 299 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 AC116353.3-201ENST00000511215 249 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 ENPP7P9-201ENST00000514456 627 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 AC117532.1-201ENST00000514638 323 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 MTCO2P32-201ENST00000514865 403 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 AL671862.1-201ENST00000515851 349 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 AC024909.2-201ENST00000553035 286 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 AL049830.4-201ENST00000555149 351 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 MIR3667-201ENST00000581025 74 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 AC022726.1-201ENST00000587475 207 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 AC124856.1-201ENST00000600819 896 ntBASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.07□□□□□ -1.6
BHLHA9Q7RTU4 AC133552.5-201ENST00000604266 540 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms