Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 AC021146.3-201ENST00000511911 260 ntBASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 RNA5SP249-201ENST00000516127 99 ntBASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 AC090515.3-201ENST00000560431 315 ntBASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 NF1P10-201ENST00000613227 742 ntBASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 AC244517.3-201ENST00000616254 1235 ntBASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 AL133268.1-201ENST00000405676 1401 ntBASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 RAD17P1-201ENST00000418130 2042 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 RNA5SP447-201ENST00000363749 119 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 U3.22-201ENST00000391120 215 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 RNA5SP146-201ENST00000410743 123 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 AC023141.6-201ENST00000429418 337 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 ARL4AP3-201ENST00000441452 574 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 AC104651.2-201ENST00000447549 528 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 MORF4L1P4-201ENST00000450245 976 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 Z95152.1-201ENST00000453556 656 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 RPL7AP52-201ENST00000458096 790 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 RPS23P7-201ENST00000466210 444 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 AC113430.1-201ENST00000506872 718 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 AC025674.1-201ENST00000507074 324 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 HPRT1P1-201ENST00000509498 657 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 AC068831.4-201ENST00000556118 109 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 AC087477.6-201ENST00000559595 843 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 MIR4277-201ENST00000578298 84 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 FAM60CP-201ENST00000591086 664 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 AL133243.1-201ENST00000614487 366 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 AL035461.2-201ENST00000619201 524 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 CASC19-206ENST00000641028 1430 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 AL445487.1-201ENST00000415694 1580 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 AC108467.2-201ENST00000617640 1597 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 AL359922.3-201ENST00000624779 1670 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 AC107068.1-201ENST00000563286 4218 ntBASIC4.26□□□□□ -1.73
H3F3CQ6NXT2 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
H3F3CQ6NXT2 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
H3F3CQ6NXT2 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
H3F3CQ6NXT2 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
H3F3CQ6NXT2 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.25□□□□□ -1.73
H3F3CQ6NXT2 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
H3F3CQ6NXT2 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
H3F3CQ6NXT2 RNA5SP28-201ENST00000363841 119 ntBASIC4.25□□□□□ -1.73
H3F3CQ6NXT2 RNU6-1251P-201ENST00000364502 107 ntBASIC4.25□□□□□ -1.73
H3F3CQ6NXT2 RNU6-146P-201ENST00000384602 108 ntBASIC4.25□□□□□ -1.73
H3F3CQ6NXT2 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.25□□□□□ -1.73
H3F3CQ6NXT2 AL590806.1-201ENST00000415818 853 ntBASIC4.25□□□□□ -1.73
H3F3CQ6NXT2 COX6CP17-201ENST00000421389 185 ntBASIC4.25□□□□□ -1.73
H3F3CQ6NXT2 AL592293.2-201ENST00000422292 996 ntBASIC4.25□□□□□ -1.73
H3F3CQ6NXT2 C4BPAP2-201ENST00000428434 478 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms