Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC6.52□□□□□ -1.37
RNF43Q68DV7 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RNF43Q68DV7 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF43Q68DV7 AC008121.3-201ENST00000618726 433 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.52□□□□□ -1.37
RNF43Q68DV7 ABBA01000935.2-201ENST00000637477 838 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
RNF43Q68DV7 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF43Q68DV7 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF43Q68DV7 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF43Q68DV7 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RNF43Q68DV7 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF43Q68DV7 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF43Q68DV7 OFD1P17-201ENST00000437639 3018 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF43Q68DV7 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF43Q68DV7 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF43Q68DV7 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 CCT4P2-201ENST00000233836 1548 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF43Q68DV7 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF43Q68DV7 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF43Q68DV7 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF43Q68DV7 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF43Q68DV7 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF43Q68DV7 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF43Q68DV7 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 RNU4-79P-201ENST00000362764 141 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 GNG5P2-201ENST00000372054 207 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 RNU6-31P-201ENST00000384388 108 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 U3.43-201ENST00000410734 213 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 Z93019.1-201ENST00000416450 973 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 MTCO3P12-201ENST00000416718 547 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 AL022238.1-201ENST00000442557 355 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 MTCO3P11-201ENST00000455103 774 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 SNORD42A-201ENST00000459584 64 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 LSM3P4-201ENST00000502948 309 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 AC091965.3-201ENST00000506236 208 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 OR5M14P-201ENST00000506803 618 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 AC009646.1-201ENST00000510455 318 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 AC013701.1-201ENST00000522657 465 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 OR4A12P-201ENST00000530847 918 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 HPRT1P3-201ENST00000539521 576 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 AC093012.1-202ENST00000549403 582 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF43Q68DV7 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF43Q68DV7 AL121821.2-201ENST00000556081 394 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 MIR3913-1-201ENST00000577744 102 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 AC233280.2-201ENST00000603917 1070 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 AC106900.2-201ENST00000604994 317 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 AC040896.1-201ENST00000613819 479 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 OR8G7P-201ENST00000616658 848 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 AL121890.2-201ENST00000617644 465 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 AL160413.1-201ENST00000622780 310 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF43Q68DV7 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF43Q68DV7 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF43Q68DV7 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF43Q68DV7 MAPK10-287ENST00000641217 3037 ntBASIC6.51□□□□□ -1.37
RNF43Q68DV7 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF43Q68DV7 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF43Q68DV7 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF43Q68DV7 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF43Q68DV7 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF43Q68DV7 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF43Q68DV7 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms