Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 YWHAEP1-201ENST00000453697 763 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 RANP2-201ENST00000456833 229 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 AC096741.1-201ENST00000472250 846 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 BTF3P13-201ENST00000513224 490 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 RN7SKP116-201ENST00000516902 319 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 ELOCP31-201ENST00000540463 467 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 AC093249.1-201ENST00000567049 203 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 AL512605.2-201ENST00000592972 256 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 BMS1P7-201ENST00000602440 1052 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 AC090971.5-201ENST00000621102 293 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 UG0898H09-202ENST00000623646 7040 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AC005332.9-201ENST00000620266 2921 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 WDR95P-201ENST00000425638 1542 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 RNA5SP350-201ENST00000363298 111 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AL122016.1-201ENST00000403365 367 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AL354719.1-201ENST00000406535 843 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AC010385.1-201ENST00000412374 256 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 SDCBPP2-201ENST00000424643 885 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 RABEPKP1-201ENST00000440529 1026 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 OR13C1P-201ENST00000457612 963 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 SNX18P26-201ENST00000458433 740 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AC016687.1-201ENST00000482574 353 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AC092824.1-201ENST00000483524 576 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AC017037.2-201ENST00000513850 890 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 RNA5SP362-201ENST00000516048 118 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AC008429.4-201ENST00000521201 182 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 PCNAP4-201ENST00000532690 730 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AL121579.2-201ENST00000555466 590 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 NIFKP8-201ENST00000560500 874 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AC009120.3-201ENST00000563335 499 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 MIR4776-2-201ENST00000580204 80 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 MIR4503-201ENST00000582187 83 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AC018638.8-201ENST00000588755 281 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 BNIP3P23-201ENST00000599655 511 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AL589674.2-201ENST00000604304 337 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AC007621.1-201ENST00000604544 437 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AC093788.1-201ENST00000609356 927 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AC006924.1-201ENST00000610750 559 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AC090527.3-201ENST00000619041 548 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 MIR6719-201ENST00000622428 87 ntBASIC7.85□□□□□ -1.15
RC3H1Q5TC82 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
RC3H1Q5TC82 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 GNL2P1-201ENST00000451274 2190 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms