Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 RPL21P67-201ENST00000402896 478 ntBASIC3.75□□□□□ -1.81
LRRK2Q5S007 OR5BE1P-201ENST00000425977 939 ntBASIC3.75□□□□□ -1.81
LRRK2Q5S007 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.75□□□□□ -1.81
LRRK2Q5S007 AC104306.1-201ENST00000449702 371 ntBASIC3.75□□□□□ -1.81
LRRK2Q5S007 AL935212.3-201ENST00000450729 284 ntBASIC3.75□□□□□ -1.81
LRRK2Q5S007 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.75□□□□□ -1.81
LRRK2Q5S007 ACTR3P3-201ENST00000480448 893 ntBASIC3.75□□□□□ -1.81
LRRK2Q5S007 AC004069.2-201ENST00000505438 1114 ntBASIC3.75□□□□□ -1.81
LRRK2Q5S007 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.75□□□□□ -1.81
LRRK2Q5S007 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC3.75□□□□□ -1.81
LRRK2Q5S007 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.75□□□□□ -1.81
LRRK2Q5S007 HSPE1P5-201ENST00000561489 272 ntBASIC3.75□□□□□ -1.81
LRRK2Q5S007 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.75□□□□□ -1.81
LRRK2Q5S007 AL592436.1-201ENST00000605135 558 ntBASIC3.75□□□□□ -1.81
LRRK2Q5S007 AL162574.1-201ENST00000615702 950 ntBASIC3.75□□□□□ -1.81
LRRK2Q5S007 FP236240.3-201ENST00000623061 327 ntBASIC3.75□□□□□ -1.81
LRRK2Q5S007 OR5BE1P-202ENST00000641168 1176 ntBASIC3.75□□□□□ -1.81
LRRK2Q5S007 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
LRRK2Q5S007 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LRRK2Q5S007 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
LRRK2Q5S007 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
LRRK2Q5S007 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LRRK2Q5S007 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LRRK2Q5S007 MUC2-202ENST00000613187 4845 ntBASIC3.75□□□□□ -1.81
LRRK2Q5S007 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LRRK2Q5S007 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LRRK2Q5S007 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
LRRK2Q5S007 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
LRRK2Q5S007 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LRRK2Q5S007 MIR490-201ENST00000384865 128 ntBASIC3.75□□□□□ -1.81
LRRK2Q5S007 COX6B1P7-201ENST00000430845 235 ntBASIC3.75□□□□□ -1.81
LRRK2Q5S007 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC3.75□□□□□ -1.81
LRRK2Q5S007 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC3.75□□□□□ -1.81
LRRK2Q5S007 AL358832.1-201ENST00000497800 389 ntBASIC3.75□□□□□ -1.81
LRRK2Q5S007 AC074250.1-201ENST00000511117 192 ntBASIC3.75□□□□□ -1.81
LRRK2Q5S007 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.75□□□□□ -1.81
LRRK2Q5S007 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.75□□□□□ -1.81
LRRK2Q5S007 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.75□□□□□ -1.81
LRRK2Q5S007 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.75□□□□□ -1.81
LRRK2Q5S007 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
LRRK2Q5S007 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LRRK2Q5S007 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
LRRK2Q5S007 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LRRK2Q5S007 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LRRK2Q5S007 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
LRRK2Q5S007 AC083899.1-201ENST00000454465 3819 ntBASIC3.74□□□□□ -1.81
LRRK2Q5S007 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
LRRK2Q5S007 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
LRRK2Q5S007 AC104260.2-201ENST00000623551 3497 ntBASIC3.74□□□□□ -1.81
LRRK2Q5S007 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
LRRK2Q5S007 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.74□□□□□ -1.81
LRRK2Q5S007 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC3.74□□□□□ -1.81
LRRK2Q5S007 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.74□□□□□ -1.81
LRRK2Q5S007 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.74□□□□□ -1.81
LRRK2Q5S007 RN7SL293P-201ENST00000481765 281 ntBASIC3.74□□□□□ -1.81
LRRK2Q5S007 AC120057.2-201ENST00000571520 271 ntBASIC3.74□□□□□ -1.81
LRRK2Q5S007 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LRRK2Q5S007 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.74□□□□□ -1.81
LRRK2Q5S007 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
LRRK2Q5S007 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC3.74□□□□□ -1.81
LRRK2Q5S007 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
LRRK2Q5S007 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.74□□□□□ -1.81
LRRK2Q5S007 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
LRRK2Q5S007 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
LRRK2Q5S007 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LRRK2Q5S007 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.74□□□□□ -1.81
LRRK2Q5S007 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LRRK2Q5S007 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LRRK2Q5S007 HSPE1P12-201ENST00000412576 301 ntBASIC3.74□□□□□ -1.81
LRRK2Q5S007 PDSS1P2-201ENST00000449397 678 ntBASIC3.74□□□□□ -1.81
LRRK2Q5S007 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC3.74□□□□□ -1.81
LRRK2Q5S007 AL139099.1-201ENST00000497398 403 ntBASIC3.74□□□□□ -1.81
LRRK2Q5S007 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.74□□□□□ -1.81
LRRK2Q5S007 AC093853.1-201ENST00000515689 483 ntBASIC3.74□□□□□ -1.81
LRRK2Q5S007 AC024224.1-201ENST00000538284 609 ntBASIC3.74□□□□□ -1.81
LRRK2Q5S007 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LRRK2Q5S007 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.74□□□□□ -1.81
LRRK2Q5S007 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC3.74□□□□□ -1.81
LRRK2Q5S007 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LRRK2Q5S007 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.74□□□□□ -1.81
LRRK2Q5S007 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LRRK2Q5S007 USP9YP4-201ENST00000424401 1745 ntBASIC3.74□□□□□ -1.81
LRRK2Q5S007 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LRRK2Q5S007 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.73□□□□□ -1.81
LRRK2Q5S007 STK3-216ENST00000523601 3107 ntTSL 2 BASIC3.73□□□□□ -1.81
LRRK2Q5S007 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LRRK2Q5S007 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LRRK2Q5S007 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
LRRK2Q5S007 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LRRK2Q5S007 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
LRRK2Q5S007 DDX18P5-201ENST00000534547 1306 ntBASIC3.73□□□□□ -1.81
LRRK2Q5S007 AL450992.3-201ENST00000413192 568 ntBASIC3.73□□□□□ -1.81
LRRK2Q5S007 AC115115.1-201ENST00000449927 248 ntBASIC3.73□□□□□ -1.81
LRRK2Q5S007 GAPDHP36-201ENST00000480688 918 ntBASIC3.73□□□□□ -1.81
LRRK2Q5S007 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.73□□□□□ -1.81
LRRK2Q5S007 RN7SL812P-201ENST00000493791 279 ntBASIC3.73□□□□□ -1.81
LRRK2Q5S007 HSPD1P15-201ENST00000505573 1122 ntBASIC3.73□□□□□ -1.81
LRRK2Q5S007 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LRRK2Q5S007 AC136777.2-201ENST00000522979 358 ntBASIC3.73□□□□□ -1.81
LRRK2Q5S007 OR5B10P-201ENST00000532869 642 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms