Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 IGJP1-201ENST00000522682 475 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 YWHABP2-201ENST00000540201 713 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 BLZF2P-201ENST00000553776 1130 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 AC022404.1-201ENST00000555320 273 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 RPP40P2-201ENST00000603596 712 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 AC011626.1-201ENST00000604710 562 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 AC024060.1-201ENST00000607052 494 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 AC034229.4-201ENST00000607861 441 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 AC100847.1-201ENST00000611316 481 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC38Q502W7 AC073869.10-201ENST00000642016 354 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 ASNSP1-204ENST00000641977 1664 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC38Q502W7 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC38Q502W7 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC38Q502W7 AC006210.2-201ENST00000367074 1545 ntBASIC5.38□□□□□ -1.55
CCDC38Q502W7 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC38Q502W7 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC38Q502W7 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC38Q502W7 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC38Q502W7 AP001273.1-201ENST00000624493 3152 ntBASIC5.38□□□□□ -1.55
CCDC38Q502W7 USP9YP4-201ENST00000424401 1745 ntBASIC5.38□□□□□ -1.55
CCDC38Q502W7 AP000568.1-201ENST00000282964 442 ntBASIC5.38□□□□□ -1.55
CCDC38Q502W7 MIR589-201ENST00000385238 99 ntBASIC5.38□□□□□ -1.55
CCDC38Q502W7 RNU1-77P-201ENST00000390868 162 ntBASIC5.38□□□□□ -1.55
CCDC38Q502W7 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC38Q502W7 BTF3P8-201ENST00000414577 526 ntBASIC5.38□□□□□ -1.55
CCDC38Q502W7 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC38Q502W7 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC38Q502W7 RPL7P4-203ENST00000430239 730 ntBASIC5.38□□□□□ -1.55
CCDC38Q502W7 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC38Q502W7 RPL21P110-201ENST00000433345 446 ntBASIC5.38□□□□□ -1.55
CCDC38Q502W7 AL353597.2-202ENST00000434901 373 ntBASIC5.38□□□□□ -1.55
CCDC38Q502W7 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC38Q502W7 GAPDHP58-201ENST00000438477 1006 ntBASIC5.38□□□□□ -1.55
CCDC38Q502W7 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC38Q502W7 GAPDHP25-201ENST00000447061 1001 ntBASIC5.38□□□□□ -1.55
CCDC38Q502W7 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC38Q502W7 MRPL35P4-201ENST00000453682 566 ntBASIC5.38□□□□□ -1.55
CCDC38Q502W7 AC108729.1-201ENST00000487812 947 ntBASIC5.38□□□□□ -1.55
CCDC38Q502W7 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.38□□□□□ -1.55
CCDC38Q502W7 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.38□□□□□ -1.55
CCDC38Q502W7 AC139103.1-201ENST00000534696 1030 ntBASIC5.38□□□□□ -1.55
CCDC38Q502W7 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC38Q502W7 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC38Q502W7 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC38Q502W7 RPAP2P1-201ENST00000603626 1168 ntBASIC5.38□□□□□ -1.55
CCDC38Q502W7 AL162431.4-201ENST00000604674 411 ntBASIC5.38□□□□□ -1.55
CCDC38Q502W7 AC010245.2-201ENST00000606908 1167 ntBASIC5.38□□□□□ -1.55
CCDC38Q502W7 AC123768.4-201ENST00000616244 701 ntBASIC5.38□□□□□ -1.55
CCDC38Q502W7 AL691477.1-201ENST00000624398 162 ntBASIC5.38□□□□□ -1.55
CCDC38Q502W7 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC38Q502W7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC38Q502W7 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC38Q502W7 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC38Q502W7 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC38Q502W7 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC38Q502W7 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC38Q502W7 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC38Q502W7 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC38Q502W7 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CCDC38Q502W7 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.37□□□□□ -1.55
CCDC38Q502W7 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC38Q502W7 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC38Q502W7 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
CCDC38Q502W7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC38Q502W7 RN7SKP206-201ENST00000410823 293 ntBASIC5.37□□□□□ -1.55
CCDC38Q502W7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC38Q502W7 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC38Q502W7 OR2AH1P-201ENST00000425717 928 ntBASIC5.37□□□□□ -1.55
CCDC38Q502W7 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC38Q502W7 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC38Q502W7 MTND1P33-201ENST00000446251 917 ntBASIC5.37□□□□□ -1.55
CCDC38Q502W7 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC38Q502W7 AC104634.1-201ENST00000452720 462 ntBASIC5.37□□□□□ -1.55
CCDC38Q502W7 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC38Q502W7 AC100832.1-201ENST00000471945 383 ntBASIC5.37□□□□□ -1.55
CCDC38Q502W7 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.37□□□□□ -1.55
CCDC38Q502W7 AC079203.1-201ENST00000487972 404 ntBASIC5.37□□□□□ -1.55
CCDC38Q502W7 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC38Q502W7 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC38Q502W7 AC010460.2-201ENST00000509054 677 ntBASIC5.37□□□□□ -1.55
CCDC38Q502W7 RNA5SP464-201ENST00000516251 108 ntBASIC5.37□□□□□ -1.55
CCDC38Q502W7 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC38Q502W7 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.37□□□□□ -1.55
CCDC38Q502W7 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms