Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AC105313.1-201ENST00000509121 353 ntBASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 GAPDHP62-201ENST00000515313 990 ntBASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AF279873.1-201ENST00000523393 313 ntBASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AL121594.2-201ENST00000541658 472 ntBASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 SERPINE4P-201ENST00000554978 281 ntBASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AC004825.1-201ENST00000555068 586 ntBASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 DUXAP1-201ENST00000556632 463 ntBASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AC019322.1-201ENST00000571869 389 ntBASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AC008088.1-201ENST00000580993 280 ntBASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 VN1R82P-201ENST00000601481 356 ntBASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AL450489.1-201ENST00000612071 468 ntBASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AC037198.3-201ENST00000616754 526 ntBASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AL512506.2-201ENST00000624472 458 ntBASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 PHKBP1-201ENST00000450951 1951 ntBASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 MAPK10-328ENST00000641553 4009 ntBASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AC006206.1-201ENST00000544842 3387 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 RAP1BP1-201ENST00000412709 553 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 MTND4P22-201ENST00000413116 1169 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 MTND4P20-201ENST00000424125 869 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 RPL7P44-201ENST00000424827 742 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AC009784.1-201ENST00000426484 460 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 CYCSP12-201ENST00000437729 300 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AC002553.2-201ENST00000453217 340 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 RNU1-88P-201ENST00000459274 128 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 RPL21P71-201ENST00000465598 459 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AC005532.2-201ENST00000467154 373 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 RPS4XP1-201ENST00000482189 787 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AC090638.1-201ENST00000498296 909 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 HIGD1AP14-201ENST00000507617 282 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AC074255.1-201ENST00000511259 501 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AC109471.1-201ENST00000511631 612 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 RNU6-488P-201ENST00000515918 99 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 RNU6-1225P-201ENST00000516336 65 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 GCSHP4-201ENST00000538792 439 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 GTF2IP8-201ENST00000560687 584 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AL163952.1-202ENST00000569625 600 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AC013444.2-201ENST00000603317 787 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AL133507.1-201ENST00000605269 557 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AL360219.1-201ENST00000610230 366 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 MIR7155-201ENST00000615925 56 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AC123768.4-201ENST00000616244 701 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AC132068.1-201ENST00000623805 459 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AC026422.1-201ENST00000623961 452 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AC009039.2-201ENST00000624524 529 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AF001550.2-201ENST00000636643 217 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 MRRFP1-201ENST00000435941 1675 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 SLC10A5P1-201ENST00000379063 1306 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AC012321.1-201ENST00000561622 1588 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AP004607.3-201ENST00000530354 3915 ntBASIC6.44□□□□□ -1.38
CCDC144BQ3MJ40 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms