Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.16□□□□□ -1.74
RFX4Q33E94 AC109780.1-201ENST00000451768 1344 ntBASIC4.16□□□□□ -1.74
RFX4Q33E94 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.16□□□□□ -1.74
RFX4Q33E94 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RFX4Q33E94 AC125257.1-201ENST00000560400 2930 ntBASIC4.15□□□□□ -1.74
RFX4Q33E94 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RFX4Q33E94 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RFX4Q33E94 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RFX4Q33E94 AC011155.1-201ENST00000316512 456 ntBASIC4.15□□□□□ -1.75
RFX4Q33E94 RNU6-697P-201ENST00000363348 107 ntBASIC4.15□□□□□ -1.75
RFX4Q33E94 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RFX4Q33E94 MT-RNR1-201ENST00000389680 954 ntBASIC4.15□□□□□ -1.75
RFX4Q33E94 RPL23AP48-201ENST00000406913 488 ntBASIC4.15□□□□□ -1.75
RFX4Q33E94 RNA5SP39-201ENST00000411245 120 ntBASIC4.15□□□□□ -1.75
RFX4Q33E94 AC140479.3-201ENST00000418944 1126 ntBASIC4.15□□□□□ -1.75
RFX4Q33E94 AC244453.4-201ENST00000419150 388 ntBASIC4.15□□□□□ -1.75
RFX4Q33E94 RAD23BP1-201ENST00000421404 1227 ntBASIC4.15□□□□□ -1.75
RFX4Q33E94 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.15□□□□□ -1.75
RFX4Q33E94 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.15□□□□□ -1.75
RFX4Q33E94 OR1H1P-201ENST00000448731 937 ntBASIC4.15□□□□□ -1.75
RFX4Q33E94 SCARNA10-201ENST00000459255 330 ntBASIC4.15□□□□□ -1.75
RFX4Q33E94 AC105918.1-201ENST00000474399 838 ntBASIC4.15□□□□□ -1.75
RFX4Q33E94 AC074386.1-201ENST00000476560 767 ntBASIC4.15□□□□□ -1.75
RFX4Q33E94 RPS6P4-201ENST00000494693 758 ntBASIC4.15□□□□□ -1.75
RFX4Q33E94 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.15□□□□□ -1.75
RFX4Q33E94 RNU6-751P-201ENST00000516382 101 ntBASIC4.15□□□□□ -1.75
RFX4Q33E94 AC022784.5-201ENST00000522241 437 ntBASIC4.15□□□□□ -1.75
RFX4Q33E94 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.15□□□□□ -1.75
RFX4Q33E94 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.15□□□□□ -1.75
RFX4Q33E94 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.15□□□□□ -1.75
RFX4Q33E94 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.15□□□□□ -1.75
RFX4Q33E94 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.15□□□□□ -1.75
RFX4Q33E94 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
RFX4Q33E94 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.15□□□□□ -1.75
RFX4Q33E94 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.15□□□□□ -1.75
RFX4Q33E94 NPM1P45-201ENST00000583151 559 ntBASIC4.15□□□□□ -1.75
RFX4Q33E94 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.15□□□□□ -1.75
RFX4Q33E94 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.15□□□□□ -1.75
RFX4Q33E94 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.15□□□□□ -1.75
RFX4Q33E94 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.15□□□□□ -1.75
RFX4Q33E94 AC090948.2-201ENST00000607363 564 ntBASIC4.15□□□□□ -1.75
RFX4Q33E94 AC233309.1-201ENST00000619522 751 ntBASIC4.15□□□□□ -1.75
RFX4Q33E94 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
RFX4Q33E94 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.15□□□□□ -1.75
RFX4Q33E94 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
RFX4Q33E94 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.15□□□□□ -1.75
RFX4Q33E94 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
RFX4Q33E94 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
RFX4Q33E94 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
RFX4Q33E94 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.15□□□□□ -1.75
RFX4Q33E94 HSPD1P11-201ENST00000508643 1702 ntBASIC4.15□□□□□ -1.75
RFX4Q33E94 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RFX4Q33E94 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.15□□□□□ -1.75
RFX4Q33E94 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.14□□□□□ -1.75
RFX4Q33E94 MAPK10-263ENST00000641052 4307 ntBASIC4.14□□□□□ -1.75
RFX4Q33E94 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.14□□□□□ -1.75
RFX4Q33E94 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RFX4Q33E94 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
RFX4Q33E94 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.14□□□□□ -1.75
RFX4Q33E94 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RFX4Q33E94 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
RFX4Q33E94 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.14□□□□□ -1.75
RFX4Q33E94 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RFX4Q33E94 RNA5SP388-201ENST00000362584 119 ntBASIC4.14□□□□□ -1.75
RFX4Q33E94 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RFX4Q33E94 SDHCP2-201ENST00000398565 501 ntBASIC4.14□□□□□ -1.75
RFX4Q33E94 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.14□□□□□ -1.75
RFX4Q33E94 RSU1P3-201ENST00000412878 835 ntBASIC4.14□□□□□ -1.75
RFX4Q33E94 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.14□□□□□ -1.75
RFX4Q33E94 AL627308.1-201ENST00000435693 821 ntBASIC4.14□□□□□ -1.75
RFX4Q33E94 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.14□□□□□ -1.75
RFX4Q33E94 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.14□□□□□ -1.75
RFX4Q33E94 RN7SL177P-201ENST00000476596 299 ntBASIC4.14□□□□□ -1.75
RFX4Q33E94 AC093270.2-201ENST00000486157 792 ntBASIC4.14□□□□□ -1.75
RFX4Q33E94 RPL36AP41-201ENST00000493820 306 ntBASIC4.14□□□□□ -1.75
RFX4Q33E94 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.14□□□□□ -1.75
RFX4Q33E94 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RFX4Q33E94 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.14□□□□□ -1.75
RFX4Q33E94 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.14□□□□□ -1.75
RFX4Q33E94 NDUFB4P12-201ENST00000513465 390 ntBASIC4.14□□□□□ -1.75
RFX4Q33E94 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.14□□□□□ -1.75
RFX4Q33E94 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.14□□□□□ -1.75
RFX4Q33E94 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.14□□□□□ -1.75
RFX4Q33E94 AC021006.3-201ENST00000530771 192 ntBASIC4.14□□□□□ -1.75
RFX4Q33E94 AC005000.1-201ENST00000536192 288 ntBASIC4.14□□□□□ -1.75
RFX4Q33E94 AP001880.2-201ENST00000538233 448 ntBASIC4.14□□□□□ -1.75
RFX4Q33E94 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.14□□□□□ -1.75
RFX4Q33E94 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.14□□□□□ -1.75
RFX4Q33E94 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.14□□□□□ -1.75
RFX4Q33E94 HMGB3P26-201ENST00000560051 582 ntBASIC4.14□□□□□ -1.75
RFX4Q33E94 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.14□□□□□ -1.75
RFX4Q33E94 BGLT3-201ENST00000564523 994 ntBASIC4.14□□□□□ -1.75
RFX4Q33E94 MTND2P13-201ENST00000577438 1039 ntBASIC4.14□□□□□ -1.75
RFX4Q33E94 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.14□□□□□ -1.75
RFX4Q33E94 AL445222.1-201ENST00000607259 628 ntBASIC4.14□□□□□ -1.75
RFX4Q33E94 AP000894.4-201ENST00000610185 483 ntBASIC4.14□□□□□ -1.75
RFX4Q33E94 SDR42E1P1-201ENST00000611327 477 ntBASIC4.14□□□□□ -1.75
RFX4Q33E94 AC016769.4-201ENST00000616893 535 ntBASIC4.14□□□□□ -1.75
RFX4Q33E94 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.14□□□□□ -1.75
RFX4Q33E94 AC021106.3-201ENST00000623925 531 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms