Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 UBA52P7-201ENST00000486088 380 ntBASIC3.85□□□□□ -1.79
USF2Q15853 RPS21P4-201ENST00000487122 248 ntBASIC3.85□□□□□ -1.79
USF2Q15853 RN7SL629P-201ENST00000489622 285 ntBASIC3.85□□□□□ -1.79
USF2Q15853 AC024558.1-201ENST00000505008 528 ntBASIC3.85□□□□□ -1.79
USF2Q15853 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.85□□□□□ -1.79
USF2Q15853 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.85□□□□□ -1.79
USF2Q15853 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.85□□□□□ -1.79
USF2Q15853 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC3.85□□□□□ -1.79
USF2Q15853 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.85□□□□□ -1.79
USF2Q15853 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USF2Q15853 AC009101.1-201ENST00000568135 242 ntBASIC3.85□□□□□ -1.79
USF2Q15853 AL121834.1-201ENST00000572284 509 ntBASIC3.85□□□□□ -1.79
USF2Q15853 SUMO2P15-201ENST00000604285 278 ntBASIC3.85□□□□□ -1.79
USF2Q15853 AC091979.2-201ENST00000607514 214 ntBASIC3.85□□□□□ -1.79
USF2Q15853 AP000864.1-201ENST00000609424 650 ntBASIC3.85□□□□□ -1.79
USF2Q15853 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.85□□□□□ -1.79
USF2Q15853 AC074276.2-201ENST00000619891 348 ntBASIC3.85□□□□□ -1.79
USF2Q15853 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.85□□□□□ -1.79
USF2Q15853 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.85□□□□□ -1.79
USF2Q15853 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC3.85□□□□□ -1.79
USF2Q15853 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.85□□□□□ -1.79
USF2Q15853 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.85□□□□□ -1.79
USF2Q15853 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.85□□□□□ -1.79
USF2Q15853 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
USF2Q15853 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.85□□□□□ -1.79
USF2Q15853 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USF2Q15853 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.85□□□□□ -1.79
USF2Q15853 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
USF2Q15853 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.85□□□□□ -1.79
USF2Q15853 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC3.85□□□□□ -1.79
USF2Q15853 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USF2Q15853 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USF2Q15853 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
USF2Q15853 Z82217.1-201ENST00000625157 8149 ntBASIC3.84□□□□□ -1.79
USF2Q15853 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
USF2Q15853 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
USF2Q15853 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
USF2Q15853 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
USF2Q15853 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
USF2Q15853 RNA5SP52-201ENST00000362448 134 ntBASIC3.84□□□□□ -1.79
USF2Q15853 RNU1-20P-201ENST00000363314 162 ntBASIC3.84□□□□□ -1.79
USF2Q15853 RN7SKP162-201ENST00000363605 345 ntBASIC3.84□□□□□ -1.79
USF2Q15853 RNU1-87P-201ENST00000363727 170 ntBASIC3.84□□□□□ -1.79
USF2Q15853 RHOT1P2-201ENST00000366423 333 ntBASIC3.84□□□□□ -1.79
USF2Q15853 MIR93-201ENST00000385024 80 ntBASIC3.84□□□□□ -1.79
USF2Q15853 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
USF2Q15853 ST13P16-201ENST00000401760 781 ntBASIC3.84□□□□□ -1.79
USF2Q15853 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC3.84□□□□□ -1.79
USF2Q15853 PRELID3BP11-201ENST00000414230 479 ntBASIC3.84□□□□□ -1.79
USF2Q15853 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.84□□□□□ -1.79
USF2Q15853 BTF3P9-201ENST00000418784 283 ntBASIC3.84□□□□□ -1.79
USF2Q15853 RPS26P13-201ENST00000419030 330 ntBASIC3.84□□□□□ -1.79
USF2Q15853 AC114814.2-201ENST00000419195 485 ntBASIC3.84□□□□□ -1.79
USF2Q15853 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.84□□□□□ -1.79
USF2Q15853 CKS1BP6-201ENST00000424932 240 ntBASIC3.84□□□□□ -1.79
USF2Q15853 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC3.84□□□□□ -1.79
USF2Q15853 AC245047.2-201ENST00000441060 530 ntBASIC3.84□□□□□ -1.79
USF2Q15853 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC3.84□□□□□ -1.79
USF2Q15853 TCEA1P1-201ENST00000449716 880 ntBASIC3.84□□□□□ -1.79
USF2Q15853 IGHV5-78-201ENST00000450948 295 ntBASIC3.84□□□□□ -1.79
USF2Q15853 OTX2P1-201ENST00000450956 354 ntBASIC3.84□□□□□ -1.79
USF2Q15853 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.84□□□□□ -1.79
USF2Q15853 RPS26P28-201ENST00000470806 348 ntBASIC3.84□□□□□ -1.79
USF2Q15853 RN7SL177P-201ENST00000476596 299 ntBASIC3.84□□□□□ -1.79
USF2Q15853 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.84□□□□□ -1.79
USF2Q15853 AC021146.7-201ENST00000509604 775 ntBASIC3.84□□□□□ -1.79
USF2Q15853 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.84□□□□□ -1.79
USF2Q15853 AC007016.1-201ENST00000512110 244 ntBASIC3.84□□□□□ -1.79
USF2Q15853 SNORA70.14-201ENST00000516205 110 ntBASIC3.84□□□□□ -1.79
USF2Q15853 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.84□□□□□ -1.79
USF2Q15853 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.84□□□□□ -1.79
USF2Q15853 NOP10-202ENST00000557912 436 ntTSL 2 BASIC3.84□□□□□ -1.79
USF2Q15853 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC3.84□□□□□ -1.79
USF2Q15853 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.84□□□□□ -1.79
USF2Q15853 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.84□□□□□ -1.79
USF2Q15853 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC3.84□□□□□ -1.79
USF2Q15853 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.84□□□□□ -1.79
USF2Q15853 AC105254.2-201ENST00000603636 436 ntBASIC3.84□□□□□ -1.79
USF2Q15853 IMMP1LP1-201ENST00000605170 488 ntBASIC3.84□□□□□ -1.79
USF2Q15853 AC005021.1-201ENST00000608730 355 ntBASIC3.84□□□□□ -1.79
USF2Q15853 AC126915.2-201ENST00000610957 190 ntBASIC3.84□□□□□ -1.79
USF2Q15853 AC099494.2-201ENST00000623371 978 ntBASIC3.84□□□□□ -1.79
USF2Q15853 AC004943.3-201ENST00000624116 600 ntBASIC3.84□□□□□ -1.79
USF2Q15853 AC019080.5-201ENST00000624891 757 ntBASIC3.84□□□□□ -1.79
USF2Q15853 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC3.84□□□□□ -1.79
USF2Q15853 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
USF2Q15853 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.84□□□□□ -1.79
USF2Q15853 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
USF2Q15853 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.84□□□□□ -1.79
USF2Q15853 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
USF2Q15853 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
USF2Q15853 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
USF2Q15853 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.84□□□□□ -1.79
USF2Q15853 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
USF2Q15853 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.84□□□□□ -1.8
USF2Q15853 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.84□□□□□ -1.8
USF2Q15853 CR788268.1-201ENST00000603931 1809 ntBASIC3.84□□□□□ -1.8
USF2Q15853 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.83□□□□□ -1.8
USF2Q15853 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.83□□□□□ -1.8
USF2Q15853 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms