Protein–RNA interactions for Protein: Q08170

SRSF4, Serine/arginine-rich splicing factor 4, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4Q08170 AL391361.1-201ENST00000405580 489 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 NACAP7-201ENST00000407371 609 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 AC010385.1-201ENST00000412374 256 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.83□□□□□ -1.64
SRSF4Q08170 CDK8P2-201ENST00000415020 547 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SRSF4Q08170 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SRSF4Q08170 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.83□□□□□ -1.64
SRSF4Q08170 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.83□□□□□ -1.64
SRSF4Q08170 SUMO2P3-201ENST00000438311 288 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.83□□□□□ -1.64
SRSF4Q08170 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.83□□□□□ -1.64
SRSF4Q08170 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.83□□□□□ -1.64
SRSF4Q08170 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.83□□□□□ -1.64
SRSF4Q08170 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.83□□□□□ -1.64
SRSF4Q08170 HMGB1P5-202ENST00000451497 985 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.83□□□□□ -1.64
SRSF4Q08170 AC011979.1-201ENST00000472300 483 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 AC023424.1-201ENST00000496058 459 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 DSTNP2-201ENST00000504533 515 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 AC113430.1-201ENST00000506872 718 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 AC008885.2-201ENST00000509506 930 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 PGBD4P4-201ENST00000509673 613 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 HIGD1AP18-201ENST00000520730 278 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.83□□□□□ -1.64
SRSF4Q08170 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.83□□□□□ -1.64
SRSF4Q08170 EEF1B2P4-201ENST00000551398 348 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.83□□□□□ -1.64
SRSF4Q08170 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.83□□□□□ -1.64
SRSF4Q08170 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.83□□□□□ -1.64
SRSF4Q08170 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.83□□□□□ -1.64
SRSF4Q08170 AC040958.1-201ENST00000561102 201 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.83□□□□□ -1.64
SRSF4Q08170 AC006272.2-201ENST00000594725 163 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.83□□□□□ -1.64
SRSF4Q08170 AL356055.1-201ENST00000602528 446 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 AL606834.2-201ENST00000602954 668 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 AC126118.1-201ENST00000607744 628 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.83□□□□□ -1.64
SRSF4Q08170 AC131235.4-201ENST00000609288 620 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 SDR42E1P1-201ENST00000611327 477 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 Z99129.1-201ENST00000612510 255 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 AC013476.2-201ENST00000614456 459 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SRSF4Q08170 AC239868.2-201ENST00000564237 4527 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRSF4Q08170 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SRSF4Q08170 AC119674.1-202ENST00000641333 1860 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRSF4Q08170 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRSF4Q08170 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRSF4Q08170 AC087359.1-201ENST00000508335 1740 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SRSF4Q08170 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.83□□□□□ -1.64
SRSF4Q08170 AP000776.1-201ENST00000530032 1663 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRSF4Q08170 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SRSF4Q08170 AC073136.1-201ENST00000449426 2884 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
SRSF4Q08170 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.82□□□□□ -1.64
SRSF4Q08170 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SRSF4Q08170 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SRSF4Q08170 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SRSF4Q08170 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SRSF4Q08170 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SRSF4Q08170 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SRSF4Q08170 AC004520.1-201ENST00000608362 1413 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
SRSF4Q08170 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SRSF4Q08170 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.82□□□□□ -1.64
SRSF4Q08170 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
SRSF4Q08170 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SRSF4Q08170 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.82□□□□□ -1.64
SRSF4Q08170 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SRSF4Q08170 RNU4-21P-201ENST00000362802 126 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 RNU6-353P-201ENST00000364266 108 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 snoZ40.1-201ENST00000364540 72 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SRSF4Q08170 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SRSF4Q08170 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SRSF4Q08170 CHMP1B2P-201ENST00000399581 597 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 AC136624.1-201ENST00000400791 413 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.82□□□□□ -1.64
SRSF4Q08170 AC016831.2-201ENST00000417179 352 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.82□□□□□ -1.64
SRSF4Q08170 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.82□□□□□ -1.64
SRSF4Q08170 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.82□□□□□ -1.64
SRSF4Q08170 ETF1P3-201ENST00000430422 1160 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 AL139415.2-201ENST00000431968 163 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 MTCO1P52-201ENST00000433928 531 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 OR3D1P-201ENST00000438288 955 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.82□□□□□ -1.64
SRSF4Q08170 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.82□□□□□ -1.64
SRSF4Q08170 RNU6-956P-201ENST00000458868 103 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 RNU7-140P-201ENST00000459546 60 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.82□□□□□ -1.64
SRSF4Q08170 AL136038.1-201ENST00000497246 351 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SRSF4Q08170 CDC42P4-201ENST00000510507 563 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms