Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RMST_10.1-201ENST00000616309 154 ntBASIC4.73□□□□□ -1.65
LTBQ06643 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.73□□□□□ -1.65
LTBQ06643 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LTBQ06643 AL353662.3-201ENST00000625131 237 ntBASIC4.73□□□□□ -1.65
LTBQ06643 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.73□□□□□ -1.65
LTBQ06643 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
LTBQ06643 CYP4F35P-202ENST00000636121 390 ntBASIC4.73□□□□□ -1.65
LTBQ06643 MIR3974-201ENST00000637126 96 ntBASIC4.73□□□□□ -1.65
LTBQ06643 AC073869.7-201ENST00000640874 297 ntBASIC4.73□□□□□ -1.65
LTBQ06643 AC073869.10-201ENST00000642016 354 ntBASIC4.73□□□□□ -1.65
LTBQ06643 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
LTBQ06643 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
LTBQ06643 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
LTBQ06643 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.73□□□□□ -1.65
LTBQ06643 AC020633.1-201ENST00000468439 2247 ntBASIC4.73□□□□□ -1.65
LTBQ06643 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LTBQ06643 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.73□□□□□ -1.65
LTBQ06643 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LTBQ06643 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LTBQ06643 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
LTBQ06643 AL450345.1-202ENST00000605741 3881 ntBASIC4.72□□□□□ -1.65
LTBQ06643 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LTBQ06643 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.72□□□□□ -1.65
LTBQ06643 AC006210.2-201ENST00000367074 1545 ntBASIC4.72□□□□□ -1.65
LTBQ06643 SMG1P4-204ENST00000523028 4131 ntBASIC4.72□□□□□ -1.65
LTBQ06643 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LTBQ06643 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LTBQ06643 MTND5P11-201ENST00000511037 1812 ntBASIC4.72□□□□□ -1.65
LTBQ06643 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LTBQ06643 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LTBQ06643 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LTBQ06643 RNU5B-1-201ENST00000363286 116 ntBASIC4.72□□□□□ -1.65
LTBQ06643 RNU6-1251P-201ENST00000364502 107 ntBASIC4.72□□□□□ -1.65
LTBQ06643 SNORA62-201ENST00000365493 153 ntBASIC4.72□□□□□ -1.65
LTBQ06643 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.72□□□□□ -1.65
LTBQ06643 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LTBQ06643 RNU1-149P-201ENST00000390870 161 ntBASIC4.72□□□□□ -1.65
LTBQ06643 GSTA12P-201ENST00000402398 508 ntBASIC4.72□□□□□ -1.65
LTBQ06643 HMGB1P13-201ENST00000406019 642 ntBASIC4.72□□□□□ -1.65
LTBQ06643 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.72□□□□□ -1.65
LTBQ06643 AC008173.1-201ENST00000418901 264 ntBASIC4.72□□□□□ -1.65
LTBQ06643 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.72□□□□□ -1.65
LTBQ06643 AC073143.1-201ENST00000436316 395 ntBASIC4.72□□□□□ -1.65
LTBQ06643 THAP5P1-201ENST00000439089 262 ntBASIC4.72□□□□□ -1.65
LTBQ06643 AC000041.1-201ENST00000439655 175 ntBASIC4.72□□□□□ -1.65
LTBQ06643 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.72□□□□□ -1.65
LTBQ06643 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.72□□□□□ -1.65
LTBQ06643 RN7SL447P-201ENST00000494711 245 ntBASIC4.72□□□□□ -1.65
LTBQ06643 RPL21P131-201ENST00000497298 483 ntBASIC4.72□□□□□ -1.65
LTBQ06643 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.72□□□□□ -1.65
LTBQ06643 NIFKP7-201ENST00000503365 834 ntBASIC4.72□□□□□ -1.65
LTBQ06643 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.72□□□□□ -1.65
LTBQ06643 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.72□□□□□ -1.65
LTBQ06643 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.72□□□□□ -1.65
LTBQ06643 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.72□□□□□ -1.65
LTBQ06643 BNIP3P1-201ENST00000547295 580 ntBASIC4.72□□□□□ -1.65
LTBQ06643 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.72□□□□□ -1.65
LTBQ06643 CBX3P2-202ENST00000583365 535 ntBASIC4.72□□□□□ -1.65
LTBQ06643 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
LTBQ06643 AC061975.8-201ENST00000587058 721 ntBASIC4.72□□□□□ -1.65
LTBQ06643 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.72□□□□□ -1.65
LTBQ06643 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.72□□□□□ -1.65
LTBQ06643 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.72□□□□□ -1.65
LTBQ06643 AP004372.1-201ENST00000604842 844 ntBASIC4.72□□□□□ -1.65
LTBQ06643 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.72□□□□□ -1.65
LTBQ06643 RMST_5.1-201ENST00000618704 126 ntBASIC4.72□□□□□ -1.65
LTBQ06643 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LTBQ06643 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.72□□□□□ -1.65
LTBQ06643 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.72□□□□□ -1.65
LTBQ06643 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LTBQ06643 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LTBQ06643 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
LTBQ06643 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LTBQ06643 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LTBQ06643 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.72□□□□□ -1.65
LTBQ06643 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.72□□□□□ -1.65
LTBQ06643 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LTBQ06643 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LTBQ06643 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
LTBQ06643 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
LTBQ06643 AC092747.4-201ENST00000620519 1861 ntBASIC4.71□□□□□ -1.66
LTBQ06643 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.71□□□□□ -1.66
LTBQ06643 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.71□□□□□ -1.66
LTBQ06643 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LTBQ06643 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
LTBQ06643 AL390862.1-201ENST00000635467 1469 ntBASIC4.71□□□□□ -1.66
LTBQ06643 Z98755.1-201ENST00000407015 1384 ntBASIC4.71□□□□□ -1.66
LTBQ06643 AC017079.1-201ENST00000333650 415 ntBASIC4.71□□□□□ -1.66
LTBQ06643 U3.3-201ENST00000362986 216 ntBASIC4.71□□□□□ -1.66
LTBQ06643 RNA5SP90-201ENST00000364801 99 ntBASIC4.71□□□□□ -1.66
LTBQ06643 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LTBQ06643 RPS16P5-201ENST00000406501 404 ntBASIC4.71□□□□□ -1.66
LTBQ06643 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.71□□□□□ -1.66
LTBQ06643 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.71□□□□□ -1.66
LTBQ06643 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
LTBQ06643 AL445213.1-201ENST00000412589 747 ntBASIC4.71□□□□□ -1.66
LTBQ06643 GLUD1P9-201ENST00000420997 1173 ntBASIC4.71□□□□□ -1.66
LTBQ06643 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.71□□□□□ -1.66
LTBQ06643 AC104837.2-201ENST00000427236 424 ntBASIC4.71□□□□□ -1.66
LTBQ06643 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms