Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AP001542.2-201ENST00000593141 364 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 BNIP3P32-201ENST00000600015 554 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 AC009597.2-201ENST00000604659 592 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 AL162431.4-201ENST00000604674 411 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 AC063944.3-201ENST00000609969 533 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.2□□□□□ -1.74
CX3CL1P78423 AC136428.4-201ENST00000634254 1155 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.2□□□□□ -1.74
CX3CL1P78423 CASC19-264ENST00000641912 1184 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CX3CL1P78423 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CX3CL1P78423 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.2□□□□□ -1.74
CX3CL1P78423 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CX3CL1P78423 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CX3CL1P78423 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CX3CL1P78423 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
CX3CL1P78423 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CX3CL1P78423 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.2□□□□□ -1.74
CX3CL1P78423 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CX3CL1P78423 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CX3CL1P78423 AL022393.1-201ENST00000625142 1677 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CX3CL1P78423 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CX3CL1P78423 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CX3CL1P78423 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.19□□□□□ -1.74
CX3CL1P78423 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CX3CL1P78423 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CX3CL1P78423 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CX3CL1P78423 STX3-208ENST00000641815 3236 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CX3CL1P78423 RN7SKP162-201ENST00000363605 345 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 RNU1-87P-201ENST00000363727 170 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 RNU4-51P-201ENST00000364206 140 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CX3CL1P78423 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CX3CL1P78423 SNORA67-201ENST00000384423 137 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CX3CL1P78423 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
CX3CL1P78423 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
CX3CL1P78423 NCSTNP1-201ENST00000406229 144 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 RPS3AP25-201ENST00000411660 793 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 OR51B3P-201ENST00000412287 913 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.19□□□□□ -1.74
CX3CL1P78423 AC007738.1-201ENST00000413892 348 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 NPM1P4-201ENST00000414095 812 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.19□□□□□ -1.74
CX3CL1P78423 GTF2IP2-201ENST00000424290 697 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 AC009965.2-201ENST00000425328 970 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 AC093655.2-201ENST00000425735 631 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 AL009174.1-201ENST00000426577 416 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 RPS26P47-201ENST00000427219 348 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 RPL7P4-203ENST00000430239 730 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.19□□□□□ -1.74
CX3CL1P78423 CFL1P1-202ENST00000432948 411 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.19□□□□□ -1.74
CX3CL1P78423 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CX3CL1P78423 ACTR3P2-201ENST00000439585 1257 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.19□□□□□ -1.74
CX3CL1P78423 AC092155.2-201ENST00000454675 477 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 OR2AO1P-201ENST00000476497 403 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 AC015724.1-201ENST00000478577 156 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 RPL7P41-201ENST00000485823 957 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 AC134050.1-201ENST00000495088 933 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 AC020699.1-201ENST00000505161 445 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.19□□□□□ -1.74
CX3CL1P78423 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.19□□□□□ -1.74
CX3CL1P78423 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.19□□□□□ -1.74
CX3CL1P78423 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.19□□□□□ -1.74
CX3CL1P78423 ATP5LP3-201ENST00000514223 304 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 AC008494.2-201ENST00000514544 370 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 AL671862.1-201ENST00000515851 349 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 RNA5SP373-201ENST00000517271 95 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.19□□□□□ -1.74
CX3CL1P78423 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CX3CL1P78423 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CX3CL1P78423 OR8K4P-201ENST00000534608 872 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CX3CL1P78423 AL049779.2-201ENST00000553847 315 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.19□□□□□ -1.74
CX3CL1P78423 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.19□□□□□ -1.74
CX3CL1P78423 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.19□□□□□ -1.74
CX3CL1P78423 RN7SL435P-201ENST00000584418 282 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CX3CL1P78423 AL137072.1-201ENST00000603444 466 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 AL450336.1-201ENST00000605180 586 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 AC013244.3-201ENST00000605614 388 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 AL583856.2-201ENST00000606298 543 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 AC009974.1-201ENST00000608881 455 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 AC010975.3-201ENST00000618727 978 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 AL121895.2-201ENST00000619558 447 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 AL109659.3-201ENST00000624985 950 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.19□□□□□ -1.74
CX3CL1P78423 AC092162.3-201ENST00000624511 1624 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.19□□□□□ -1.74
CX3CL1P78423 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CX3CL1P78423 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CX3CL1P78423 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CX3CL1P78423 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CX3CL1P78423 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CX3CL1P78423 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms