Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC063976.2-201ENST00000425667 3556 ntBASIC4.02□□□□□ -1.77
LMO4P61968 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LMO4P61968 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
LMO4P61968 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LMO4P61968 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
LMO4P61968 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.01□□□□□ -1.77
LMO4P61968 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.01□□□□□ -1.77
LMO4P61968 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LMO4P61968 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
LMO4P61968 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LMO4P61968 AC083837.1-201ENST00000565297 2994 ntBASIC4.01□□□□□ -1.77
LMO4P61968 CASC19-260ENST00000641828 2001 ntBASIC4.01□□□□□ -1.77
LMO4P61968 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.01□□□□□ -1.77
LMO4P61968 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LMO4P61968 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
LMO4P61968 RNU5E-10P-201ENST00000363506 118 ntBASIC4.01□□□□□ -1.77
LMO4P61968 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LMO4P61968 SNORD116-2-201ENST00000384274 95 ntBASIC4.01□□□□□ -1.77
LMO4P61968 SNORD116-6-201ENST00000384711 96 ntBASIC4.01□□□□□ -1.77
LMO4P61968 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
LMO4P61968 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LMO4P61968 MTCO2P31-201ENST00000402702 684 ntBASIC4.01□□□□□ -1.77
LMO4P61968 RANP4-201ENST00000413361 655 ntBASIC4.01□□□□□ -1.77
LMO4P61968 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.01□□□□□ -1.77
LMO4P61968 AC069213.2-201ENST00000420238 366 ntBASIC4.01□□□□□ -1.77
LMO4P61968 AL645608.4-201ENST00000423619 154 ntBASIC4.01□□□□□ -1.77
LMO4P61968 HSPE1P16-201ENST00000426640 348 ntBASIC4.01□□□□□ -1.77
LMO4P61968 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.01□□□□□ -1.77
LMO4P61968 RPL5P2-201ENST00000429598 854 ntBASIC4.01□□□□□ -1.77
LMO4P61968 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.01□□□□□ -1.77
LMO4P61968 AC068287.1-201ENST00000430283 295 ntBASIC4.01□□□□□ -1.77
LMO4P61968 MTND5P25-201ENST00000430499 799 ntBASIC4.01□□□□□ -1.77
LMO4P61968 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.01□□□□□ -1.77
LMO4P61968 RPL12P28-201ENST00000430852 489 ntBASIC4.01□□□□□ -1.77
LMO4P61968 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.01□□□□□ -1.77
LMO4P61968 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.01□□□□□ -1.77
LMO4P61968 AL591719.1-201ENST00000444669 744 ntBASIC4.01□□□□□ -1.77
LMO4P61968 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LMO4P61968 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.01□□□□□ -1.77
LMO4P61968 PSMC1P13-201ENST00000458195 985 ntBASIC4.01□□□□□ -1.77
LMO4P61968 RPL32P14-201ENST00000463196 378 ntBASIC4.01□□□□□ -1.77
LMO4P61968 RN7SL354P-201ENST00000469282 294 ntBASIC4.01□□□□□ -1.77
LMO4P61968 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
LMO4P61968 RPL12P20-201ENST00000475538 479 ntBASIC4.01□□□□□ -1.77
LMO4P61968 CR383656.1-201ENST00000484916 377 ntBASIC4.01□□□□□ -1.77
LMO4P61968 AC104971.1-201ENST00000495117 578 ntBASIC4.01□□□□□ -1.77
LMO4P61968 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.01□□□□□ -1.77
LMO4P61968 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.01□□□□□ -1.77
LMO4P61968 RNU5A-7P-201ENST00000515979 116 ntBASIC4.01□□□□□ -1.77
LMO4P61968 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.01□□□□□ -1.77
LMO4P61968 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.01□□□□□ -1.77
LMO4P61968 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.01□□□□□ -1.77
LMO4P61968 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.01□□□□□ -1.77
LMO4P61968 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.01□□□□□ -1.77
LMO4P61968 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.01□□□□□ -1.77
LMO4P61968 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.01□□□□□ -1.77
LMO4P61968 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.01□□□□□ -1.77
LMO4P61968 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.01□□□□□ -1.77
LMO4P61968 AC087894.1-201ENST00000538359 518 ntBASIC4.01□□□□□ -1.77
LMO4P61968 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.01□□□□□ -1.77
LMO4P61968 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.01□□□□□ -1.77
LMO4P61968 AC133555.2-201ENST00000550213 292 ntBASIC4.01□□□□□ -1.77
LMO4P61968 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LMO4P61968 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.01□□□□□ -1.77
LMO4P61968 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.01□□□□□ -1.77
LMO4P61968 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
LMO4P61968 AL450336.1-201ENST00000605180 586 ntBASIC4.01□□□□□ -1.77
LMO4P61968 AC004775.1-201ENST00000607389 753 ntBASIC4.01□□□□□ -1.77
LMO4P61968 Z95327.3-201ENST00000610385 572 ntBASIC4.01□□□□□ -1.77
LMO4P61968 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.01□□□□□ -1.77
LMO4P61968 AC025016.1-201ENST00000616746 682 ntBASIC4.01□□□□□ -1.77
LMO4P61968 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.01□□□□□ -1.77
LMO4P61968 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.01□□□□□ -1.77
LMO4P61968 AP002967.1-201ENST00000624203 539 ntBASIC4.01□□□□□ -1.77
LMO4P61968 AC119674.1-212ENST00000641155 993 ntBASIC4.01□□□□□ -1.77
LMO4P61968 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.01□□□□□ -1.77
LMO4P61968 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
LMO4P61968 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.01□□□□□ -1.77
LMO4P61968 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.01□□□□□ -1.77
LMO4P61968 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.01□□□□□ -1.77
LMO4P61968 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LMO4P61968 Z98755.1-201ENST00000407015 1384 ntBASIC4.01□□□□□ -1.77
LMO4P61968 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.01□□□□□ -1.77
LMO4P61968 AC009501.3-201ENST00000605001 1352 ntBASIC4.01□□□□□ -1.77
LMO4P61968 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LMO4P61968 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
LMO4P61968 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LMO4P61968 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4□□□□□ -1.77
LMO4P61968 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
LMO4P61968 AP001029.2-203ENST00000589795 4910 ntBASIC4□□□□□ -1.77
LMO4P61968 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4□□□□□ -1.77
LMO4P61968 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4□□□□□ -1.77
LMO4P61968 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LMO4P61968 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
LMO4P61968 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
LMO4P61968 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
LMO4P61968 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4□□□□□ -1.77
LMO4P61968 AL590240.1-201ENST00000334118 313 ntBASIC4□□□□□ -1.77
LMO4P61968 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4□□□□□ -1.77
LMO4P61968 RPS3AP23-201ENST00000401762 784 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms