Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC108467.2-201ENST00000617640 1597 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CLDN18P56856 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.14□□□□□ -1.75
CLDN18P56856 OR51C1P-202ENST00000641159 1444 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.14□□□□□ -1.75
CLDN18P56856 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDN18P56856 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDN18P56856 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDN18P56856 RPS27AP7-201ENST00000422792 455 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDN18P56856 AJ239321.1-201ENST00000424255 564 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 OR2AH1P-201ENST00000425717 928 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 MTCO3P21-201ENST00000430791 643 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 NMNAT1P2-201ENST00000435192 860 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 CYCSP42-201ENST00000450823 238 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 AC009220.1-201ENST00000451614 275 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 AL591473.1-201ENST00000464297 313 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDN18P56856 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDN18P56856 HMGB3P16-201ENST00000508037 287 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 MTCO3P42-201ENST00000509488 518 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 MTCO3P39-201ENST00000514812 518 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 MTCYBP19-201ENST00000517463 1124 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 RAB9BP1-201ENST00000519581 626 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 HIGD1AP5-201ENST00000529959 259 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 GSTP1P1-201ENST00000548078 319 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDN18P56856 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.14□□□□□ -1.75
CLDN18P56856 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.14□□□□□ -1.75
CLDN18P56856 AC009303.3-201ENST00000591103 736 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 RPL12P25-202ENST00000598100 674 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.14□□□□□ -1.75
CLDN18P56856 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 AL049536.1-201ENST00000625043 744 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.14□□□□□ -1.75
CLDN18P56856 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CLDN18P56856 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDN18P56856 OR56B2P-202ENST00000641377 2453 ntBASIC4.14□□□□□ -1.75
CLDN18P56856 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDN18P56856 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN18P56856 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN18P56856 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN18P56856 AC126323.6-202ENST00000568092 3511 ntBASIC4.13□□□□□ -1.75
CLDN18P56856 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.13□□□□□ -1.75
CLDN18P56856 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CLDN18P56856 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN18P56856 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CLDN18P56856 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CLDN18P56856 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.13□□□□□ -1.75
CLDN18P56856 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN18P56856 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.13□□□□□ -1.75
CLDN18P56856 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN18P56856 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.13□□□□□ -1.75
CLDN18P56856 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.13□□□□□ -1.75
CLDN18P56856 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN18P56856 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN18P56856 MIR141-201ENST00000384975 95 ntBASIC4.13□□□□□ -1.75
CLDN18P56856 OR1F12-201ENST00000402365 945 ntBASIC4.13□□□□□ -1.75
CLDN18P56856 AL080315.1-201ENST00000406055 466 ntBASIC4.13□□□□□ -1.75
CLDN18P56856 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.13□□□□□ -1.75
CLDN18P56856 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.13□□□□□ -1.75
CLDN18P56856 AC016397.1-201ENST00000412463 242 ntBASIC4.13□□□□□ -1.75
CLDN18P56856 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.13□□□□□ -1.75
CLDN18P56856 HMGB1P32-201ENST00000425971 565 ntBASIC4.13□□□□□ -1.75
CLDN18P56856 MTCO1P45-201ENST00000431457 267 ntBASIC4.13□□□□□ -1.75
CLDN18P56856 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.13□□□□□ -1.75
CLDN18P56856 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.13□□□□□ -1.75
CLDN18P56856 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.13□□□□□ -1.75
CLDN18P56856 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.13□□□□□ -1.75
CLDN18P56856 OR51K1P-201ENST00000510214 950 ntBASIC4.13□□□□□ -1.75
CLDN18P56856 HMGB3P13-201ENST00000511263 607 ntBASIC4.13□□□□□ -1.75
CLDN18P56856 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.13□□□□□ -1.75
CLDN18P56856 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.13□□□□□ -1.75
CLDN18P56856 RNA5SP303-201ENST00000516192 130 ntBASIC4.13□□□□□ -1.75
CLDN18P56856 AC134698.5-201ENST00000519444 336 ntBASIC4.13□□□□□ -1.75
CLDN18P56856 VTA1P2-201ENST00000520205 911 ntBASIC4.13□□□□□ -1.75
CLDN18P56856 C1GALT1P3-201ENST00000522049 819 ntBASIC4.13□□□□□ -1.75
CLDN18P56856 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.13□□□□□ -1.75
CLDN18P56856 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.13□□□□□ -1.75
CLDN18P56856 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.13□□□□□ -1.75
CLDN18P56856 AC084783.1-201ENST00000565846 910 ntBASIC4.13□□□□□ -1.75
CLDN18P56856 AF230666.2-201ENST00000602328 725 ntBASIC4.13□□□□□ -1.75
CLDN18P56856 AC008782.1-201ENST00000603386 430 ntBASIC4.13□□□□□ -1.75
CLDN18P56856 AL158196.1-201ENST00000616786 434 ntBASIC4.13□□□□□ -1.75
CLDN18P56856 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.13□□□□□ -1.75
CLDN18P56856 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CLDN18P56856 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN18P56856 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CLDN18P56856 AL137100.1-201ENST00000556703 1620 ntBASIC4.13□□□□□ -1.75
CLDN18P56856 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN18P56856 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLDN18P56856 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLDN18P56856 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CLDN18P56856 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.12□□□□□ -1.75
CLDN18P56856 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLDN18P56856 AL445437.1-201ENST00000623157 3087 ntBASIC4.12□□□□□ -1.75
CLDN18P56856 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLDN18P56856 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.12□□□□□ -1.75
CLDN18P56856 MIR659-201ENST00000384963 97 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms