Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.63□□□□□ -1.51
GFRA1P56159 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.63□□□□□ -1.51
GFRA1P56159 AC010857.1-201ENST00000606398 594 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.63□□□□□ -1.51
GFRA1P56159 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.63□□□□□ -1.51
GFRA1P56159 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.63□□□□□ -1.51
GFRA1P56159 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
GFRA1P56159 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.63□□□□□ -1.51
GFRA1P56159 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
GFRA1P56159 AL606537.1-201ENST00000607258 2011 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 AC027575.3-201ENST00000583058 2747 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA1P56159 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.63□□□□□ -1.51
GFRA1P56159 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA1P56159 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA1P56159 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
GFRA1P56159 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA1P56159 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA1P56159 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
GFRA1P56159 BIN2P1-201ENST00000504996 1530 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA1P56159 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.63□□□□□ -1.51
GFRA1P56159 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.63□□□□□ -1.51
GFRA1P56159 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA1P56159 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.62□□□□□ -1.51
GFRA1P56159 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
GFRA1P56159 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA1P56159 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA1P56159 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA1P56159 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA1P56159 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA1P56159 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA1P56159 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA1P56159 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA1P56159 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA1P56159 RNA5SP110-201ENST00000362638 115 ntBASIC5.62□□□□□ -1.51
GFRA1P56159 Y_RNA.554-201ENST00000384672 102 ntBASIC5.62□□□□□ -1.51
GFRA1P56159 U3.23-201ENST00000391132 200 ntBASIC5.62□□□□□ -1.51
GFRA1P56159 AL360271.1-201ENST00000395679 510 ntBASIC5.62□□□□□ -1.51
GFRA1P56159 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.62□□□□□ -1.51
GFRA1P56159 RNA5SP115-201ENST00000411160 107 ntBASIC5.62□□□□□ -1.51
GFRA1P56159 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.62□□□□□ -1.51
GFRA1P56159 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA1P56159 RPL7P30-201ENST00000420888 709 ntBASIC5.62□□□□□ -1.51
GFRA1P56159 PSMD10P2-201ENST00000432890 672 ntBASIC5.62□□□□□ -1.51
GFRA1P56159 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.62□□□□□ -1.51
GFRA1P56159 SKP1P1-201ENST00000438081 489 ntBASIC5.62□□□□□ -1.51
GFRA1P56159 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.62□□□□□ -1.51
GFRA1P56159 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.62□□□□□ -1.51
GFRA1P56159 AL645937.3-201ENST00000453647 936 ntBASIC5.62□□□□□ -1.51
GFRA1P56159 Z83838.1-202ENST00000456225 839 ntBASIC5.62□□□□□ -1.51
GFRA1P56159 FCF1P3-201ENST00000496394 590 ntBASIC5.62□□□□□ -1.51
GFRA1P56159 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.62□□□□□ -1.51
GFRA1P56159 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.62□□□□□ -1.51
GFRA1P56159 SOD1P3-201ENST00000518682 454 ntBASIC5.62□□□□□ -1.51
GFRA1P56159 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.62□□□□□ -1.51
GFRA1P56159 AC005363.1-201ENST00000530779 351 ntBASIC5.62□□□□□ -1.51
GFRA1P56159 TOMM20P1-201ENST00000534518 427 ntBASIC5.62□□□□□ -1.51
GFRA1P56159 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.62□□□□□ -1.51
GFRA1P56159 AC124947.2-202ENST00000552735 133 ntBASIC5.62□□□□□ -1.51
GFRA1P56159 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.62□□□□□ -1.51
GFRA1P56159 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.62□□□□□ -1.51
GFRA1P56159 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.62□□□□□ -1.51
GFRA1P56159 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.62□□□□□ -1.51
GFRA1P56159 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA1P56159 AL133338.2-201ENST00000604292 736 ntBASIC5.62□□□□□ -1.51
GFRA1P56159 AC112191.3-201ENST00000604371 277 ntBASIC5.62□□□□□ -1.51
GFRA1P56159 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.62□□□□□ -1.51
GFRA1P56159 AC097468.3-201ENST00000607956 456 ntBASIC5.62□□□□□ -1.51
GFRA1P56159 AP001437.1-201ENST00000608783 456 ntBASIC5.62□□□□□ -1.51
GFRA1P56159 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.62□□□□□ -1.51
GFRA1P56159 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.62□□□□□ -1.51
GFRA1P56159 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.62□□□□□ -1.51
GFRA1P56159 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.62□□□□□ -1.51
GFRA1P56159 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA1P56159 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.62□□□□□ -1.51
GFRA1P56159 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA1P56159 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.62□□□□□ -1.51
GFRA1P56159 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
GFRA1P56159 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.62□□□□□ -1.51
GFRA1P56159 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA1P56159 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA1P56159 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
GFRA1P56159 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA1P56159 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.62□□□□□ -1.51
GFRA1P56159 AC021242.1-201ENST00000507315 2035 ntBASIC5.62□□□□□ -1.51
GFRA1P56159 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA1P56159 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA1P56159 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
GFRA1P56159 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA1P56159 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA1P56159 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.61□□□□□ -1.51
GFRA1P56159 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.61□□□□□ -1.51
GFRA1P56159 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA1P56159 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA1P56159 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA1P56159 RNU4-12P-201ENST00000365233 139 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA1P56159 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
GFRA1P56159 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms