Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 AL691477.1-201ENST00000624398 162 ntBASIC6.12□□□□□ -1.43
NCKAP1LP55160 AC099654.12-201ENST00000639868 649 ntBASIC6.12□□□□□ -1.43
NCKAP1LP55160 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NCKAP1LP55160 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NCKAP1LP55160 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.12□□□□□ -1.43
NCKAP1LP55160 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.12□□□□□ -1.43
NCKAP1LP55160 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.12□□□□□ -1.43
NCKAP1LP55160 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NCKAP1LP55160 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NCKAP1LP55160 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NCKAP1LP55160 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NCKAP1LP55160 Y_RNA.11-201ENST00000362375 109 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 RNA5SP242-201ENST00000364171 118 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 SNORD65-201ENST00000391079 73 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 AGR3-202ENST00000402239 563 ntTSL 2 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 AL079342.2-201ENST00000403367 482 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 MTCO3P31-201ENST00000405526 789 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 MIR548F1-201ENST00000408667 84 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 AC027644.1-201ENST00000419595 298 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 FNDC3CP-201ENST00000420795 1155 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 AC023128.2-201ENST00000420880 1223 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 AL590103.1-201ENST00000434488 307 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 VN1R54P-201ENST00000435210 1049 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 USP9YP22-201ENST00000438971 294 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 AL390119.1-201ENST00000440329 312 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 MTND3P1-201ENST00000441336 220 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 USP9YP29-201ENST00000445112 563 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 AC003071.1-201ENST00000451219 789 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 AZGP1P2-201ENST00000454506 345 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 RPSAP39-201ENST00000467439 883 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 SNRPCP3-201ENST00000474888 476 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 AC091959.2-201ENST00000477363 321 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 RN7SL466P-201ENST00000497546 295 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 AC093281.2-201ENST00000510153 597 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 GTF2IP11-201ENST00000526931 420 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NCKAP1LP55160 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 AC012146.2-201ENST00000576545 416 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 MTND1P15-201ENST00000579262 949 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 SNORD95-201ENST00000579879 68 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 AC018809.2-201ENST00000602436 3823 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 AC025857.2-201ENST00000602711 238 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 U73023.1-201ENST00000603134 700 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 AC097505.1-201ENST00000610199 565 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 AC015922.4-201ENST00000612568 690 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 AC025594.3-201ENST00000613068 790 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NCKAP1LP55160 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NCKAP1LP55160 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NCKAP1LP55160 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.11□□□□□ -1.43
NCKAP1LP55160 AL355852.1-201ENST00000454081 1771 ntBASIC6.11□□□□□ -1.43
NCKAP1LP55160 AC004656.1-201ENST00000568479 4951 ntBASIC6.1□□□□□ -1.43
NCKAP1LP55160 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.1□□□□□ -1.43
NCKAP1LP55160 AL137100.1-201ENST00000556703 1620 ntBASIC6.1□□□□□ -1.43
NCKAP1LP55160 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
NCKAP1LP55160 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NCKAP1LP55160 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
NCKAP1LP55160 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NCKAP1LP55160 AC004076.2-201ENST00000620532 3323 ntBASIC6.1□□□□□ -1.43
NCKAP1LP55160 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
NCKAP1LP55160 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NCKAP1LP55160 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NCKAP1LP55160 RNU6-500P-201ENST00000362349 107 ntBASIC6.1□□□□□ -1.43
NCKAP1LP55160 RNU6-931P-201ENST00000363850 107 ntBASIC6.1□□□□□ -1.43
NCKAP1LP55160 RNA5SP234-201ENST00000363916 119 ntBASIC6.1□□□□□ -1.43
NCKAP1LP55160 RNU6-560P-201ENST00000364007 108 ntBASIC6.1□□□□□ -1.43
NCKAP1LP55160 RNA5SP435-201ENST00000364044 108 ntBASIC6.1□□□□□ -1.43
NCKAP1LP55160 snoZ40.1-201ENST00000364540 72 ntBASIC6.1□□□□□ -1.43
NCKAP1LP55160 RN7SKP124-201ENST00000364730 341 ntBASIC6.1□□□□□ -1.43
NCKAP1LP55160 MIR551A-201ENST00000385042 96 ntBASIC6.1□□□□□ -1.43
NCKAP1LP55160 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms