Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
EPHB3P54753 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.04□□□□□ -1.44
EPHB3P54753 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
EPHB3P54753 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
EPHB3P54753 MFSD8-219ENST00000641228 2559 ntBASIC6.04□□□□□ -1.44
EPHB3P54753 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
EPHB3P54753 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
EPHB3P54753 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
EPHB3P54753 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.03□□□□□ -1.44
EPHB3P54753 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
EPHB3P54753 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
EPHB3P54753 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
EPHB3P54753 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
EPHB3P54753 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
EPHB3P54753 AL354685.2-201ENST00000448218 1447 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
EPHB3P54753 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.03□□□□□ -1.44
EPHB3P54753 ZNF402P-201ENST00000404435 3100 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
EPHB3P54753 RNU6-181P-201ENST00000363225 107 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 RN7SKP162-201ENST00000363605 345 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC6.03□□□□□ -1.44
EPHB3P54753 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.03□□□□□ -1.44
EPHB3P54753 RNU6-116P-201ENST00000384042 109 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 RNU6-549P-201ENST00000384433 107 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.03□□□□□ -1.44
EPHB3P54753 AC027644.1-201ENST00000419595 298 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.03□□□□□ -1.44
EPHB3P54753 AC004448.2-201ENST00000422360 586 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 RPL21P43-201ENST00000425440 472 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC6.03□□□□□ -1.44
EPHB3P54753 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
EPHB3P54753 LARP1BP3-201ENST00000437229 869 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 HMGB1P31-201ENST00000437242 427 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6.03□□□□□ -1.44
EPHB3P54753 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC6.03□□□□□ -1.44
EPHB3P54753 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC6.03□□□□□ -1.44
EPHB3P54753 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.03□□□□□ -1.44
EPHB3P54753 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.03□□□□□ -1.44
EPHB3P54753 AL355032.1-201ENST00000472981 438 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 RN7SL184P-201ENST00000488308 297 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 AC147055.4-201ENST00000504399 745 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC6.03□□□□□ -1.44
EPHB3P54753 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC6.03□□□□□ -1.44
EPHB3P54753 AC027308.1-201ENST00000517993 110 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC6.03□□□□□ -1.44
EPHB3P54753 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.03□□□□□ -1.44
EPHB3P54753 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.03□□□□□ -1.44
EPHB3P54753 AC074029.1-201ENST00000552531 1044 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC6.03□□□□□ -1.44
EPHB3P54753 MTCO1P40-201ENST00000574371 625 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC6.03□□□□□ -1.44
EPHB3P54753 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.03□□□□□ -1.44
EPHB3P54753 SUMO2P15-201ENST00000604285 278 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 AC116618.1-201ENST00000634617 774 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
EPHB3P54753 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
EPHB3P54753 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
EPHB3P54753 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.03□□□□□ -1.44
EPHB3P54753 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
EPHB3P54753 AC000367.1-201ENST00000452711 1766 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
EPHB3P54753 AC022034.1-201ENST00000512867 2156 ntBASIC6.03□□□□□ -1.44
EPHB3P54753 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.03□□□□□ -1.44
EPHB3P54753 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.44
EPHB3P54753 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
EPHB3P54753 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
EPHB3P54753 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.02□□□□□ -1.45
EPHB3P54753 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
EPHB3P54753 AC137056.2-201ENST00000624055 1958 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
EPHB3P54753 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
EPHB3P54753 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC6.02□□□□□ -1.45
EPHB3P54753 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
EPHB3P54753 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
EPHB3P54753 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
EPHB3P54753 GAPDHP24-201ENST00000328713 983 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 RNA5SP131-201ENST00000365452 119 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
EPHB3P54753 RNU6-259P-201ENST00000383999 107 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 SNORD65-201ENST00000391079 73 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.02□□□□□ -1.45
EPHB3P54753 FGF7P8-201ENST00000402994 292 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 GAPDHP42-201ENST00000406848 981 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 AL356968.2-201ENST00000412769 1257 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC6.02□□□□□ -1.45
EPHB3P54753 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 AC009480.2-201ENST00000422916 432 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 AC012498.1-201ENST00000424037 437 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 TRIM60P10Y-201ENST00000425589 751 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.02□□□□□ -1.45
EPHB3P54753 CNOT7P1-201ENST00000429006 852 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 TRIM60P8Y-201ENST00000436338 762 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 AC012075.1-201ENST00000436549 580 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 AC096775.1-201ENST00000437724 448 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 OR7E116P-201ENST00000448529 957 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 SSXP1-201ENST00000453640 473 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms