Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.88□□□□□ -1.63
ATXN3P54252 ASNSP1-201ENST00000518311 1939 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3P54252 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
ATXN3P54252 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3P54252 DDX18P3-201ENST00000404856 2007 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 AC021242.1-201ENST00000507315 2035 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 AC091046.3-201ENST00000631455 1574 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
ATXN3P54252 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3P54252 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.87□□□□□ -1.63
ATXN3P54252 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3P54252 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3P54252 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3P54252 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3P54252 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ATXN3P54252 AL035696.2-201ENST00000407941 709 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 GTF2IP5-201ENST00000414608 731 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.87□□□□□ -1.63
ATXN3P54252 RPS20P1-201ENST00000434853 354 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 MRPS33P4-201ENST00000434892 317 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.87□□□□□ -1.63
ATXN3P54252 AC005154.2-201ENST00000438110 379 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 AC016831.4-201ENST00000438302 307 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 AC004980.3-201ENST00000447046 365 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 AC239367.2-201ENST00000447309 705 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.87□□□□□ -1.63
ATXN3P54252 AC010733.1-201ENST00000451515 401 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 AL591473.1-201ENST00000464297 313 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 AC090686.1-201ENST00000481577 749 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 AC005412.2-201ENST00000492004 341 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 RPS27AP16-201ENST00000492222 470 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.87□□□□□ -1.63
ATXN3P54252 AC108157.1-201ENST00000510511 539 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 RN7SKP122-201ENST00000515923 296 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 RNU6-760P-201ENST00000516078 97 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.87□□□□□ -1.63
ATXN3P54252 HIGD1AP18-201ENST00000520730 278 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.87□□□□□ -1.63
ATXN3P54252 AC008083.2-201ENST00000546707 476 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.87□□□□□ -1.63
ATXN3P54252 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.87□□□□□ -1.63
ATXN3P54252 AGGF1P9-201ENST00000561884 913 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.87□□□□□ -1.63
ATXN3P54252 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.87□□□□□ -1.63
ATXN3P54252 AL590392.1-201ENST00000604960 446 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3P54252 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.87□□□□□ -1.63
ATXN3P54252 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3P54252 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3P54252 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.87□□□□□ -1.63
ATXN3P54252 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
ATXN3P54252 OR51C1P-202ENST00000641159 1444 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3P54252 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.87□□□□□ -1.63
ATXN3P54252 SCN1A-220ENST00000641603 12506 ntBASIC4.87□□□□□ -1.63
ATXN3P54252 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3P54252 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3P54252 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3P54252 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATXN3P54252 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATXN3P54252 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATXN3P54252 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
ATXN3P54252 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
ATXN3P54252 AC006971.1-201ENST00000407916 4486 ntBASIC4.86□□□□□ -1.63
ATXN3P54252 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.86□□□□□ -1.63
ATXN3P54252 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.86□□□□□ -1.63
ATXN3P54252 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATXN3P54252 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATXN3P54252 AL589655.1-201ENST00000405398 482 ntBASIC4.86□□□□□ -1.63
ATXN3P54252 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.86□□□□□ -1.63
ATXN3P54252 MIR1193-201ENST00000408109 78 ntBASIC4.86□□□□□ -1.63
ATXN3P54252 EIF4A1P3-201ENST00000411521 244 ntBASIC4.86□□□□□ -1.63
ATXN3P54252 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.86□□□□□ -1.63
ATXN3P54252 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.86□□□□□ -1.63
ATXN3P54252 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.86□□□□□ -1.63
ATXN3P54252 RPL36AP15-201ENST00000444514 266 ntBASIC4.86□□□□□ -1.63
ATXN3P54252 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATXN3P54252 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATXN3P54252 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.86□□□□□ -1.63
ATXN3P54252 AC093770.1-201ENST00000511559 571 ntBASIC4.86□□□□□ -1.63
ATXN3P54252 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.86□□□□□ -1.63
ATXN3P54252 RNU6-347P-201ENST00000516658 105 ntBASIC4.86□□□□□ -1.63
ATXN3P54252 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.86□□□□□ -1.63
ATXN3P54252 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.86□□□□□ -1.63
ATXN3P54252 BNIP3P5-201ENST00000562290 498 ntBASIC4.86□□□□□ -1.63
ATXN3P54252 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.86□□□□□ -1.63
ATXN3P54252 AC068790.7-201ENST00000602347 528 ntBASIC4.86□□□□□ -1.63
ATXN3P54252 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.86□□□□□ -1.63
ATXN3P54252 MLECP1-201ENST00000615893 709 ntBASIC4.86□□□□□ -1.63
ATXN3P54252 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.86□□□□□ -1.63
ATXN3P54252 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATXN3P54252 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATXN3P54252 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
ATXN3P54252 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATXN3P54252 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
ATXN3P54252 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
ATXN3P54252 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
ATXN3P54252 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATXN3P54252 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms