Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC006427.1-201ENST00000514359 712 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 SNORD116-26-201ENST00000516006 96 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.97□□□□□ -1.61
LIMK1P53667 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.97□□□□□ -1.61
LIMK1P53667 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.97□□□□□ -1.61
LIMK1P53667 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.97□□□□□ -1.61
LIMK1P53667 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.97□□□□□ -1.61
LIMK1P53667 AL109766.1-201ENST00000555080 552 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.97□□□□□ -1.61
LIMK1P53667 AL049870.4-201ENST00000555741 486 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.97□□□□□ -1.61
LIMK1P53667 AC079148.1-201ENST00000565944 819 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 AC110743.1-201ENST00000584870 478 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.97□□□□□ -1.61
LIMK1P53667 AC093765.1-201ENST00000603758 881 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 AC008814.1-201ENST00000603797 406 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 AL049844.2-201ENST00000604280 628 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 AC073137.1-201ENST00000605636 634 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 AC005972.3-201ENST00000606304 481 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.97□□□□□ -1.61
LIMK1P53667 AP006248.3-201ENST00000623580 594 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 AP003400.3-201ENST00000624904 346 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.97□□□□□ -1.61
LIMK1P53667 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
LIMK1P53667 OR52H1-202ENST00000641796 1061 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.97□□□□□ -1.61
LIMK1P53667 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LIMK1P53667 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.97□□□□□ -1.61
LIMK1P53667 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LIMK1P53667 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LIMK1P53667 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LIMK1P53667 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LIMK1P53667 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
LIMK1P53667 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
LIMK1P53667 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.96□□□□□ -1.62
LIMK1P53667 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LIMK1P53667 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
LIMK1P53667 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LIMK1P53667 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
LIMK1P53667 RNA5SP191-201ENST00000362585 102 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 RNU6-984P-201ENST00000363236 109 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LIMK1P53667 OR1L6-202ENST00000373684 1044 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 UBBP2-201ENST00000376781 231 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 SNORD56.6-201ENST00000384569 71 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
LIMK1P53667 GSTM3P2-201ENST00000412746 530 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LIMK1P53667 AL592293.2-201ENST00000422292 996 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
LIMK1P53667 RPL34P6-201ENST00000432390 345 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LIMK1P53667 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.96□□□□□ -1.62
LIMK1P53667 AC122718.1-201ENST00000439448 744 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.96□□□□□ -1.62
LIMK1P53667 FAM133DP-201ENST00000464802 691 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.96□□□□□ -1.62
LIMK1P53667 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.96□□□□□ -1.62
LIMK1P53667 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.96□□□□□ -1.62
LIMK1P53667 RN7SKP276-201ENST00000516242 268 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.96□□□□□ -1.62
LIMK1P53667 AP003049.1-201ENST00000529418 457 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.96□□□□□ -1.62
LIMK1P53667 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.96□□□□□ -1.62
LIMK1P53667 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.96□□□□□ -1.62
LIMK1P53667 OR11H3P-201ENST00000554547 982 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
LIMK1P53667 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.96□□□□□ -1.62
LIMK1P53667 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
LIMK1P53667 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.96□□□□□ -1.62
LIMK1P53667 AC025175.1-201ENST00000606482 759 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 AC004775.1-201ENST00000607389 753 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 AC110792.4-201ENST00000609843 298 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 AL512506.1-201ENST00000613918 449 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 AC139769.3-201ENST00000618383 175 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 AL445493.3-201ENST00000619568 477 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 AP006248.2-201ENST00000623309 592 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 AC135068.5-201ENST00000624197 983 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.96□□□□□ -1.62
LIMK1P53667 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.96□□□□□ -1.62
LIMK1P53667 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LIMK1P53667 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
LIMK1P53667 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LIMK1P53667 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LIMK1P53667 AL022393.1-201ENST00000625142 1677 ntBASIC4.96□□□□□ -1.62
LIMK1P53667 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LIMK1P53667 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
LIMK1P53667 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
LIMK1P53667 SAMMSON-226ENST00000642089 1582 ntBASIC4.95□□□□□ -1.62
LIMK1P53667 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.95□□□□□ -1.62
LIMK1P53667 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LIMK1P53667 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LIMK1P53667 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LIMK1P53667 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.95□□□□□ -1.62
LIMK1P53667 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
LIMK1P53667 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LIMK1P53667 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LIMK1P53667 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LIMK1P53667 RNA5SP515-201ENST00000364570 118 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms