Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.09□□□□□ -1.75
HCFC1P51610 AC008758.3-201ENST00000507003 1829 ntBASIC4.09□□□□□ -1.75
HCFC1P51610 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HCFC1P51610 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HCFC1P51610 MFSD8-220ENST00000641243 1422 ntBASIC4.09□□□□□ -1.75
HCFC1P51610 OR14L1P-202ENST00000641545 3009 ntBASIC4.09□□□□□ -1.75
HCFC1P51610 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
HCFC1P51610 AC100778.3-201ENST00000580060 1750 ntBASIC4.09□□□□□ -1.75
HCFC1P51610 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.09□□□□□ -1.75
HCFC1P51610 ASNSP1-204ENST00000641977 1664 ntBASIC4.09□□□□□ -1.75
HCFC1P51610 AC104118.1-201ENST00000607625 1589 ntBASIC4.09□□□□□ -1.76
HCFC1P51610 AC005261.4-201ENST00000600047 1385 ntBASIC4.09□□□□□ -1.76
HCFC1P51610 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.09□□□□□ -1.76
HCFC1P51610 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
HCFC1P51610 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HCFC1P51610 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HCFC1P51610 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.09□□□□□ -1.76
HCFC1P51610 GNG5P5-201ENST00000420444 220 ntBASIC4.09□□□□□ -1.76
HCFC1P51610 LINC00993-201ENST00000420453 540 ntBASIC4.09□□□□□ -1.76
HCFC1P51610 RAD23BP1-201ENST00000421404 1227 ntBASIC4.09□□□□□ -1.76
HCFC1P51610 AL158073.1-201ENST00000426848 1104 ntBASIC4.09□□□□□ -1.76
HCFC1P51610 RPS29P17-201ENST00000430795 166 ntBASIC4.09□□□□□ -1.76
HCFC1P51610 XKRY2-201ENST00000442362 1093 ntBASIC4.09□□□□□ -1.76
HCFC1P51610 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.09□□□□□ -1.76
HCFC1P51610 AC078857.1-201ENST00000469870 667 ntBASIC4.09□□□□□ -1.76
HCFC1P51610 MTCO3P27-201ENST00000514397 196 ntBASIC4.09□□□□□ -1.76
HCFC1P51610 HMGB1P23-201ENST00000518743 568 ntBASIC4.09□□□□□ -1.76
HCFC1P51610 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.09□□□□□ -1.76
HCFC1P51610 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HCFC1P51610 AC073091.2-201ENST00000603205 907 ntBASIC4.09□□□□□ -1.76
HCFC1P51610 AP004372.1-201ENST00000604842 844 ntBASIC4.09□□□□□ -1.76
HCFC1P51610 AC023510.2-201ENST00000622162 746 ntBASIC4.09□□□□□ -1.76
HCFC1P51610 AC010608.3-201ENST00000625048 527 ntBASIC4.09□□□□□ -1.76
HCFC1P51610 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.09□□□□□ -1.76
HCFC1P51610 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HCFC1P51610 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.09□□□□□ -1.76
HCFC1P51610 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.08□□□□□ -1.76
HCFC1P51610 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HCFC1P51610 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.08□□□□□ -1.76
HCFC1P51610 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HCFC1P51610 STX3-208ENST00000641815 3236 ntBASIC4.08□□□□□ -1.76
HCFC1P51610 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.08□□□□□ -1.76
HCFC1P51610 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HCFC1P51610 AP000756.2-201ENST00000624168 2567 ntBASIC4.08□□□□□ -1.76
HCFC1P51610 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HCFC1P51610 RNU4-27P-201ENST00000410889 139 ntBASIC4.08□□□□□ -1.76
HCFC1P51610 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.08□□□□□ -1.76
HCFC1P51610 CKS1BP6-201ENST00000424932 240 ntBASIC4.08□□□□□ -1.76
HCFC1P51610 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HCFC1P51610 AC007563.3-201ENST00000433233 371 ntBASIC4.08□□□□□ -1.76
HCFC1P51610 RPL23AP93-201ENST00000440847 484 ntBASIC4.08□□□□□ -1.76
HCFC1P51610 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.08□□□□□ -1.76
HCFC1P51610 AL157884.3-201ENST00000448273 1184 ntBASIC4.08□□□□□ -1.76
HCFC1P51610 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.08□□□□□ -1.76
HCFC1P51610 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.08□□□□□ -1.76
HCFC1P51610 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.08□□□□□ -1.76
HCFC1P51610 NIFKP7-201ENST00000503365 834 ntBASIC4.08□□□□□ -1.76
HCFC1P51610 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HCFC1P51610 AC091868.1-201ENST00000508746 304 ntBASIC4.08□□□□□ -1.76
HCFC1P51610 RNA5SP303-201ENST00000516192 130 ntBASIC4.08□□□□□ -1.76
HCFC1P51610 TRAV8-5-201ENST00000537369 341 ntBASIC4.08□□□□□ -1.76
HCFC1P51610 AC021483.2-201ENST00000567415 758 ntBASIC4.08□□□□□ -1.76
HCFC1P51610 SNORA74C-1-201ENST00000580726 201 ntBASIC4.08□□□□□ -1.76
HCFC1P51610 AC073111.2-201ENST00000605657 1075 ntBASIC4.08□□□□□ -1.76
HCFC1P51610 AC026741.1-201ENST00000605892 482 ntBASIC4.08□□□□□ -1.76
HCFC1P51610 AL450270.1-201ENST00000606160 391 ntBASIC4.08□□□□□ -1.76
HCFC1P51610 AC012409.3-201ENST00000611343 981 ntBASIC4.08□□□□□ -1.76
HCFC1P51610 AC024941.1-201ENST00000612250 334 ntBASIC4.08□□□□□ -1.76
HCFC1P51610 AC009269.6-201ENST00000621778 588 ntBASIC4.08□□□□□ -1.76
HCFC1P51610 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HCFC1P51610 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HCFC1P51610 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.08□□□□□ -1.76
HCFC1P51610 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
HCFC1P51610 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
HCFC1P51610 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HCFC1P51610 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
HCFC1P51610 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HCFC1P51610 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HCFC1P51610 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
HCFC1P51610 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HCFC1P51610 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HCFC1P51610 MIR383-201ENST00000362257 73 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 MIR620-201ENST00000385232 95 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.07□□□□□ -1.76
HCFC1P51610 AC013429.2-201ENST00000418798 781 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.07□□□□□ -1.76
HCFC1P51610 HMGN1P5-201ENST00000448591 263 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 AC108463.1-201ENST00000450258 347 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.07□□□□□ -1.76
HCFC1P51610 AC104629.2-201ENST00000468627 598 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.07□□□□□ -1.76
HCFC1P51610 IGLVIV-65-201ENST00000517313 360 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 AC068339.2-201ENST00000534395 618 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.07□□□□□ -1.76
HCFC1P51610 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.07□□□□□ -1.76
HCFC1P51610 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
HCFC1P51610 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.07□□□□□ -1.76
HCFC1P51610 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.07□□□□□ -1.76
HCFC1P51610 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.07□□□□□ -1.76
HCFC1P51610 RN7SL176P-201ENST00000580352 264 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms