Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.76□□□□□ -1.65
BRCC3P46736 ARAFP2-201ENST00000440565 559 ntBASIC4.76□□□□□ -1.65
BRCC3P46736 RPL7P32-201ENST00000457119 744 ntBASIC4.76□□□□□ -1.65
BRCC3P46736 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.76□□□□□ -1.65
BRCC3P46736 AL161747.1-201ENST00000480068 358 ntBASIC4.76□□□□□ -1.65
BRCC3P46736 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.76□□□□□ -1.65
BRCC3P46736 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BRCC3P46736 TRAV8-5-201ENST00000537369 341 ntBASIC4.76□□□□□ -1.65
BRCC3P46736 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.76□□□□□ -1.65
BRCC3P46736 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
BRCC3P46736 PSMB7P1-201ENST00000556349 514 ntBASIC4.76□□□□□ -1.65
BRCC3P46736 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.76□□□□□ -1.65
BRCC3P46736 RN7SL435P-201ENST00000584418 282 ntBASIC4.76□□□□□ -1.65
BRCC3P46736 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.76□□□□□ -1.65
BRCC3P46736 COX6CP4-201ENST00000605798 228 ntBASIC4.76□□□□□ -1.65
BRCC3P46736 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.76□□□□□ -1.65
BRCC3P46736 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.76□□□□□ -1.65
BRCC3P46736 AC022106.2-201ENST00000620114 757 ntBASIC4.76□□□□□ -1.65
BRCC3P46736 AP003497.2-201ENST00000624220 967 ntBASIC4.76□□□□□ -1.65
BRCC3P46736 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BRCC3P46736 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BRCC3P46736 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
BRCC3P46736 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.75□□□□□ -1.65
BRCC3P46736 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRCC3P46736 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRCC3P46736 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRCC3P46736 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BRCC3P46736 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRCC3P46736 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRCC3P46736 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
BRCC3P46736 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BRCC3P46736 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRCC3P46736 RNU6-819P-201ENST00000364116 107 ntBASIC4.75□□□□□ -1.65
BRCC3P46736 MTND3P20-201ENST00000407663 186 ntBASIC4.75□□□□□ -1.65
BRCC3P46736 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BRCC3P46736 OR13Z1P-201ENST00000416141 834 ntBASIC4.75□□□□□ -1.65
BRCC3P46736 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BRCC3P46736 ARAFP1-201ENST00000422172 605 ntBASIC4.75□□□□□ -1.65
BRCC3P46736 Z74021.1-201ENST00000423610 407 ntBASIC4.75□□□□□ -1.65
BRCC3P46736 AJ239321.1-201ENST00000424255 564 ntBASIC4.75□□□□□ -1.65
BRCC3P46736 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.75□□□□□ -1.65
BRCC3P46736 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.75□□□□□ -1.65
BRCC3P46736 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BRCC3P46736 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.75□□□□□ -1.65
BRCC3P46736 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.75□□□□□ -1.65
BRCC3P46736 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.75□□□□□ -1.65
BRCC3P46736 NUTF2P3-201ENST00000448540 384 ntBASIC4.75□□□□□ -1.65
BRCC3P46736 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.75□□□□□ -1.65
BRCC3P46736 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
BRCC3P46736 STRADBP1-201ENST00000478954 1281 ntBASIC4.75□□□□□ -1.65
BRCC3P46736 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.75□□□□□ -1.65
BRCC3P46736 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.75□□□□□ -1.65
BRCC3P46736 AK4P6-201ENST00000505168 528 ntBASIC4.75□□□□□ -1.65
BRCC3P46736 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.75□□□□□ -1.65
BRCC3P46736 RNU6-319P-201ENST00000516025 108 ntBASIC4.75□□□□□ -1.65
BRCC3P46736 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.75□□□□□ -1.65
BRCC3P46736 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
BRCC3P46736 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.75□□□□□ -1.65
BRCC3P46736 BPIFA4P-203ENST00000603168 689 ntBASIC4.75□□□□□ -1.65
BRCC3P46736 AC023762.1-201ENST00000603280 584 ntBASIC4.75□□□□□ -1.65
BRCC3P46736 AC113403.1-201ENST00000604910 193 ntBASIC4.75□□□□□ -1.65
BRCC3P46736 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
BRCC3P46736 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.75□□□□□ -1.65
BRCC3P46736 AL445567.2-201ENST00000618935 498 ntBASIC4.75□□□□□ -1.65
BRCC3P46736 AC015871.5-202ENST00000623252 701 ntBASIC4.75□□□□□ -1.65
BRCC3P46736 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.75□□□□□ -1.65
BRCC3P46736 AC126323.6-202ENST00000568092 3511 ntBASIC4.75□□□□□ -1.65
BRCC3P46736 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BRCC3P46736 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.75□□□□□ -1.65
BRCC3P46736 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BRCC3P46736 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.75□□□□□ -1.65
BRCC3P46736 AC087565.3-202ENST00000642085 1603 ntBASIC4.75□□□□□ -1.65
BRCC3P46736 NEAT1-202ENST00000501122 22743 ntBASIC4.75□□□□□ -1.65
BRCC3P46736 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
BRCC3P46736 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRCC3P46736 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BRCC3P46736 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BRCC3P46736 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
BRCC3P46736 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BRCC3P46736 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BRCC3P46736 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BRCC3P46736 OR5T3-201ENST00000303059 1023 ntBASIC4.74□□□□□ -1.65
BRCC3P46736 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
BRCC3P46736 AL607077.1-201ENST00000401718 499 ntBASIC4.74□□□□□ -1.65
BRCC3P46736 AC233289.1-201ENST00000403700 508 ntBASIC4.74□□□□□ -1.65
BRCC3P46736 AL356967.1-201ENST00000406305 431 ntBASIC4.74□□□□□ -1.65
BRCC3P46736 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.74□□□□□ -1.65
BRCC3P46736 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BRCC3P46736 AC013470.3-201ENST00000420252 1194 ntBASIC4.74□□□□□ -1.65
BRCC3P46736 AC007064.3-201ENST00000422608 359 ntBASIC4.74□□□□□ -1.65
BRCC3P46736 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.74□□□□□ -1.65
BRCC3P46736 HMGB3P10-201ENST00000434734 572 ntBASIC4.74□□□□□ -1.65
BRCC3P46736 BTBD7P2-201ENST00000441962 620 ntBASIC4.74□□□□□ -1.65
BRCC3P46736 MTND3P4-201ENST00000453537 303 ntBASIC4.74□□□□□ -1.65
BRCC3P46736 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.74□□□□□ -1.65
BRCC3P46736 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.74□□□□□ -1.65
BRCC3P46736 AC007688.1-201ENST00000475592 759 ntBASIC4.74□□□□□ -1.65
BRCC3P46736 AC041039.1-201ENST00000485656 536 ntBASIC4.74□□□□□ -1.65
BRCC3P46736 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.74□□□□□ -1.65
BRCC3P46736 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms