Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MAPK10-303ENST00000641324 3959 ntBASIC4.28□□□□□ -1.72
SHC1P29353 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
SHC1P29353 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
SHC1P29353 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.27□□□□□ -1.73
SHC1P29353 AL627171.1-201ENST00000618845 1308 ntBASIC4.27□□□□□ -1.73
SHC1P29353 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHC1P29353 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHC1P29353 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SHC1P29353 AL035419.1-201ENST00000397037 564 ntBASIC4.27□□□□□ -1.73
SHC1P29353 RN7SKP247-201ENST00000411094 308 ntBASIC4.27□□□□□ -1.73
SHC1P29353 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.27□□□□□ -1.73
SHC1P29353 GLUD1P9-201ENST00000420997 1173 ntBASIC4.27□□□□□ -1.73
SHC1P29353 RPL7P57-201ENST00000423238 740 ntBASIC4.27□□□□□ -1.73
SHC1P29353 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.27□□□□□ -1.73
SHC1P29353 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.27□□□□□ -1.73
SHC1P29353 MRPL50P1-201ENST00000431951 384 ntBASIC4.27□□□□□ -1.73
SHC1P29353 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.27□□□□□ -1.73
SHC1P29353 TXNP2-201ENST00000443918 295 ntBASIC4.27□□□□□ -1.73
SHC1P29353 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.27□□□□□ -1.73
SHC1P29353 AL591623.2-201ENST00000449978 222 ntBASIC4.27□□□□□ -1.73
SHC1P29353 AC005008.1-201ENST00000456151 612 ntBASIC4.27□□□□□ -1.73
SHC1P29353 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.27□□□□□ -1.73
SHC1P29353 RN7SL817P-201ENST00000480777 288 ntBASIC4.27□□□□□ -1.73
SHC1P29353 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.27□□□□□ -1.73
SHC1P29353 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.27□□□□□ -1.73
SHC1P29353 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.27□□□□□ -1.73
SHC1P29353 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.27□□□□□ -1.73
SHC1P29353 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.27□□□□□ -1.73
SHC1P29353 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.27□□□□□ -1.73
SHC1P29353 OR5M2P-201ENST00000529003 936 ntBASIC4.27□□□□□ -1.73
SHC1P29353 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.27□□□□□ -1.73
SHC1P29353 GSTP1P1-201ENST00000548078 319 ntBASIC4.27□□□□□ -1.73
SHC1P29353 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.27□□□□□ -1.73
SHC1P29353 AL121594.4-201ENST00000556211 1196 ntBASIC4.27□□□□□ -1.73
SHC1P29353 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.27□□□□□ -1.73
SHC1P29353 RPL21P7-201ENST00000557463 483 ntBASIC4.27□□□□□ -1.73
SHC1P29353 AC105129.1-201ENST00000560250 297 ntBASIC4.27□□□□□ -1.73
SHC1P29353 AC122134.1-201ENST00000565664 1104 ntBASIC4.27□□□□□ -1.73
SHC1P29353 AC098935.2-201ENST00000604222 466 ntBASIC4.27□□□□□ -1.73
SHC1P29353 AC063944.3-201ENST00000609969 533 ntBASIC4.27□□□□□ -1.73
SHC1P29353 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.27□□□□□ -1.73
SHC1P29353 AC097520.1-201ENST00000624435 385 ntBASIC4.27□□□□□ -1.73
SHC1P29353 AC008993.2-201ENST00000631744 806 ntBASIC4.27□□□□□ -1.73
SHC1P29353 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.27□□□□□ -1.73
SHC1P29353 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SHC1P29353 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.27□□□□□ -1.73
SHC1P29353 AC110792.3-201ENST00000595906 1614 ntBASIC4.27□□□□□ -1.73
SHC1P29353 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHC1P29353 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SHC1P29353 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SHC1P29353 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.27□□□□□ -1.73
SHC1P29353 AL445487.1-201ENST00000415694 1580 ntBASIC4.27□□□□□ -1.73
SHC1P29353 AC007382.1-201ENST00000624376 2618 ntBASIC4.26□□□□□ -1.73
SHC1P29353 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHC1P29353 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHC1P29353 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHC1P29353 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHC1P29353 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.26□□□□□ -1.73
SHC1P29353 MIR585-201ENST00000384887 94 ntBASIC4.26□□□□□ -1.73
SHC1P29353 AL590762.2-201ENST00000395798 571 ntBASIC4.26□□□□□ -1.73
SHC1P29353 AL139128.1-201ENST00000413921 941 ntBASIC4.26□□□□□ -1.73
SHC1P29353 AC009237.10-201ENST00000414112 510 ntBASIC4.26□□□□□ -1.73
SHC1P29353 BX510359.2-201ENST00000417920 305 ntBASIC4.26□□□□□ -1.73
SHC1P29353 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.26□□□□□ -1.73
SHC1P29353 AC006466.1-201ENST00000438721 289 ntBASIC4.26□□□□□ -1.73
SHC1P29353 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.26□□□□□ -1.73
SHC1P29353 ARL4AP3-201ENST00000441452 574 ntBASIC4.26□□□□□ -1.73
SHC1P29353 AL606517.1-201ENST00000446914 387 ntBASIC4.26□□□□□ -1.73
SHC1P29353 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.26□□□□□ -1.73
SHC1P29353 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.26□□□□□ -1.73
SHC1P29353 AC078857.1-201ENST00000469870 667 ntBASIC4.26□□□□□ -1.73
SHC1P29353 AC108729.2-201ENST00000476543 840 ntBASIC4.26□□□□□ -1.73
SHC1P29353 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.26□□□□□ -1.73
SHC1P29353 RNU1-6P-201ENST00000516290 144 ntBASIC4.26□□□□□ -1.73
SHC1P29353 VTA1P2-201ENST00000520205 911 ntBASIC4.26□□□□□ -1.73
SHC1P29353 AC068339.2-201ENST00000534395 618 ntBASIC4.26□□□□□ -1.73
SHC1P29353 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.26□□□□□ -1.73
SHC1P29353 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.26□□□□□ -1.73
SHC1P29353 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.26□□□□□ -1.73
SHC1P29353 AC074029.2-201ENST00000551045 634 ntBASIC4.26□□□□□ -1.73
SHC1P29353 ATP5J2P6-201ENST00000565203 266 ntBASIC4.26□□□□□ -1.73
SHC1P29353 MIR4675-201ENST00000577898 77 ntBASIC4.26□□□□□ -1.73
SHC1P29353 RN7SL176P-201ENST00000580352 264 ntBASIC4.26□□□□□ -1.73
SHC1P29353 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.26□□□□□ -1.73
SHC1P29353 AC006116.7-201ENST00000590141 756 ntBASIC4.26□□□□□ -1.73
SHC1P29353 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.26□□□□□ -1.73
SHC1P29353 AC073091.2-201ENST00000603205 907 ntBASIC4.26□□□□□ -1.73
SHC1P29353 AC135178.6-201ENST00000605314 398 ntBASIC4.26□□□□□ -1.73
SHC1P29353 AL158050.2-201ENST00000605336 568 ntBASIC4.26□□□□□ -1.73
SHC1P29353 MIR7703-201ENST00000620784 77 ntBASIC4.26□□□□□ -1.73
SHC1P29353 AC095038.2-201ENST00000621464 1070 ntBASIC4.26□□□□□ -1.73
SHC1P29353 AC140113.4-201ENST00000622087 222 ntBASIC4.26□□□□□ -1.73
SHC1P29353 AL138955.1-201ENST00000622881 1040 ntBASIC4.26□□□□□ -1.73
SHC1P29353 OR4G3P-201ENST00000633500 913 ntBASIC4.26□□□□□ -1.73
SHC1P29353 AL356118.1-201ENST00000635272 1078 ntBASIC4.26□□□□□ -1.73
SHC1P29353 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHC1P29353 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHC1P29353 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHC1P29353 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SHC1P29353 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms