Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.5□□□□□ -1.69
PTPN6P29350 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PTPN6P29350 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN6P29350 AC108751.5-201ENST00000492880 1336 ntBASIC4.49□□□□□ -1.69
PTPN6P29350 AC099654.2-201ENST00000433031 1980 ntBASIC4.49□□□□□ -1.69
PTPN6P29350 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
PTPN6P29350 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
PTPN6P29350 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN6P29350 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
PTPN6P29350 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN6P29350 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PTPN6P29350 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN6P29350 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN6P29350 AL590762.2-201ENST00000395798 571 ntBASIC4.49□□□□□ -1.69
PTPN6P29350 MIR921-201ENST00000401133 56 ntBASIC4.49□□□□□ -1.69
PTPN6P29350 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.49□□□□□ -1.69
PTPN6P29350 AL080315.1-201ENST00000406055 466 ntBASIC4.49□□□□□ -1.69
PTPN6P29350 MTND4LP14-201ENST00000429447 288 ntBASIC4.49□□□□□ -1.69
PTPN6P29350 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.49□□□□□ -1.69
PTPN6P29350 AC006466.1-201ENST00000438721 289 ntBASIC4.49□□□□□ -1.69
PTPN6P29350 GEMIN8P3-201ENST00000445417 720 ntBASIC4.49□□□□□ -1.69
PTPN6P29350 AC005229.2-201ENST00000456995 399 ntBASIC4.49□□□□□ -1.69
PTPN6P29350 RPL23AP12-201ENST00000467573 473 ntBASIC4.49□□□□□ -1.69
PTPN6P29350 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.49□□□□□ -1.69
PTPN6P29350 AC083982.1-201ENST00000485679 344 ntBASIC4.49□□□□□ -1.69
PTPN6P29350 SNORD116-26-201ENST00000516006 96 ntBASIC4.49□□□□□ -1.69
PTPN6P29350 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.49□□□□□ -1.69
PTPN6P29350 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.49□□□□□ -1.69
PTPN6P29350 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.49□□□□□ -1.69
PTPN6P29350 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.49□□□□□ -1.69
PTPN6P29350 BGLT3-201ENST00000564523 994 ntBASIC4.49□□□□□ -1.69
PTPN6P29350 MIR5699-201ENST00000578903 90 ntBASIC4.49□□□□□ -1.69
PTPN6P29350 COX6CP4-201ENST00000605798 228 ntBASIC4.49□□□□□ -1.69
PTPN6P29350 AC015802.5-201ENST00000607478 399 ntBASIC4.49□□□□□ -1.69
PTPN6P29350 AC017076.1-201ENST00000607613 578 ntBASIC4.49□□□□□ -1.69
PTPN6P29350 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.49□□□□□ -1.69
PTPN6P29350 MIR6798-201ENST00000612887 67 ntBASIC4.49□□□□□ -1.69
PTPN6P29350 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.49□□□□□ -1.69
PTPN6P29350 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN6P29350 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.49□□□□□ -1.69
PTPN6P29350 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PTPN6P29350 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN6P29350 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN6P29350 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN6P29350 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PTPN6P29350 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PTPN6P29350 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN6P29350 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PTPN6P29350 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PTPN6P29350 VN2R3P-201ENST00000422626 1412 ntBASIC4.48□□□□□ -1.69
PTPN6P29350 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.48□□□□□ -1.69
PTPN6P29350 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PTPN6P29350 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTPN6P29350 AL031119.1-201ENST00000404707 1879 ntBASIC4.48□□□□□ -1.69
PTPN6P29350 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PTPN6P29350 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PTPN6P29350 OR56B2P-201ENST00000317102 954 ntBASIC4.48□□□□□ -1.69
PTPN6P29350 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PTPN6P29350 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PTPN6P29350 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PTPN6P29350 U3.30-201ENST00000391308 210 ntBASIC4.48□□□□□ -1.69
PTPN6P29350 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PTPN6P29350 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.48□□□□□ -1.69
PTPN6P29350 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.48□□□□□ -1.69
PTPN6P29350 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.48□□□□□ -1.69
PTPN6P29350 CR848007.2-201ENST00000424918 787 ntBASIC4.48□□□□□ -1.69
PTPN6P29350 NPM1P24-201ENST00000428039 894 ntBASIC4.48□□□□□ -1.69
PTPN6P29350 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.48□□□□□ -1.69
PTPN6P29350 RSL24D1P8-201ENST00000434442 492 ntBASIC4.48□□□□□ -1.69
PTPN6P29350 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.48□□□□□ -1.69
PTPN6P29350 OR52J1P-201ENST00000450596 932 ntBASIC4.48□□□□□ -1.69
PTPN6P29350 AC092324.1-201ENST00000468671 324 ntBASIC4.48□□□□□ -1.69
PTPN6P29350 RN7SL817P-201ENST00000480777 288 ntBASIC4.48□□□□□ -1.69
PTPN6P29350 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
PTPN6P29350 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.48□□□□□ -1.69
PTPN6P29350 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.48□□□□□ -1.69
PTPN6P29350 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.48□□□□□ -1.69
PTPN6P29350 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.48□□□□□ -1.69
PTPN6P29350 MORF4L1P3-201ENST00000525966 950 ntBASIC4.48□□□□□ -1.69
PTPN6P29350 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTPN6P29350 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.48□□□□□ -1.69
PTPN6P29350 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.48□□□□□ -1.69
PTPN6P29350 AC023158.1-201ENST00000561632 1025 ntBASIC4.48□□□□□ -1.69
PTPN6P29350 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
PTPN6P29350 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.48□□□□□ -1.69
PTPN6P29350 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.48□□□□□ -1.69
PTPN6P29350 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.48□□□□□ -1.69
PTPN6P29350 AC020910.3-201ENST00000603701 874 ntBASIC4.48□□□□□ -1.69
PTPN6P29350 AL031320.1-201ENST00000604177 357 ntBASIC4.48□□□□□ -1.69
PTPN6P29350 AL049844.2-201ENST00000604280 628 ntBASIC4.48□□□□□ -1.69
PTPN6P29350 AC011472.4-201ENST00000615848 491 ntBASIC4.48□□□□□ -1.69
PTPN6P29350 AC100827.5-201ENST00000615883 426 ntBASIC4.48□□□□□ -1.69
PTPN6P29350 AC016957.2-201ENST00000616998 848 ntBASIC4.48□□□□□ -1.69
PTPN6P29350 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.48□□□□□ -1.69
PTPN6P29350 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.48□□□□□ -1.69
PTPN6P29350 AC004232.3-201ENST00000622977 525 ntBASIC4.48□□□□□ -1.69
PTPN6P29350 AC091953.3-201ENST00000623220 236 ntBASIC4.48□□□□□ -1.69
PTPN6P29350 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.48□□□□□ -1.69
PTPN6P29350 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.48□□□□□ -1.69
PTPN6P29350 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms