Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.13□□□□□ -1.59
EPHA3P29320 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.13□□□□□ -1.59
EPHA3P29320 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.13□□□□□ -1.59
EPHA3P29320 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.13□□□□□ -1.59
EPHA3P29320 VIS1.1-201ENST00000610517 203 ntBASIC5.13□□□□□ -1.59
EPHA3P29320 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
EPHA3P29320 AC006840.1-201ENST00000623069 542 ntBASIC5.13□□□□□ -1.59
EPHA3P29320 AC139792.2-201ENST00000624218 587 ntBASIC5.13□□□□□ -1.59
EPHA3P29320 OR8B1P-202ENST00000641132 1178 ntBASIC5.13□□□□□ -1.59
EPHA3P29320 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
EPHA3P29320 AC104260.2-201ENST00000623551 3497 ntBASIC5.13□□□□□ -1.59
EPHA3P29320 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
EPHA3P29320 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
EPHA3P29320 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.13□□□□□ -1.59
EPHA3P29320 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
EPHA3P29320 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.13□□□□□ -1.59
EPHA3P29320 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
EPHA3P29320 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.13□□□□□ -1.59
EPHA3P29320 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.12□□□□□ -1.59
EPHA3P29320 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EPHA3P29320 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
EPHA3P29320 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EPHA3P29320 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
EPHA3P29320 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.12□□□□□ -1.59
EPHA3P29320 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.12□□□□□ -1.59
EPHA3P29320 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
EPHA3P29320 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.12□□□□□ -1.59
EPHA3P29320 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
EPHA3P29320 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.12□□□□□ -1.59
EPHA3P29320 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
EPHA3P29320 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
EPHA3P29320 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EPHA3P29320 RNU4-72P-201ENST00000410754 173 ntBASIC5.12□□□□□ -1.59
EPHA3P29320 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.12□□□□□ -1.59
EPHA3P29320 GAPDHP49-201ENST00000421421 961 ntBASIC5.12□□□□□ -1.59
EPHA3P29320 SRSF1P1-201ENST00000424058 520 ntBASIC5.12□□□□□ -1.59
EPHA3P29320 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.12□□□□□ -1.59
EPHA3P29320 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.12□□□□□ -1.59
EPHA3P29320 MTCO1P3-201ENST00000429327 192 ntBASIC5.12□□□□□ -1.59
EPHA3P29320 MTND1P32-201ENST00000433043 938 ntBASIC5.12□□□□□ -1.59
EPHA3P29320 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
EPHA3P29320 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.12□□□□□ -1.59
EPHA3P29320 RPL23AP76-201ENST00000441860 458 ntBASIC5.12□□□□□ -1.59
EPHA3P29320 AL935212.3-201ENST00000450729 284 ntBASIC5.12□□□□□ -1.59
EPHA3P29320 DNAJB5P1-201ENST00000454004 806 ntBASIC5.12□□□□□ -1.59
EPHA3P29320 AL133244.1-201ENST00000456007 258 ntBASIC5.12□□□□□ -1.59
EPHA3P29320 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.12□□□□□ -1.59
EPHA3P29320 AC126121.1-201ENST00000482313 553 ntBASIC5.12□□□□□ -1.59
EPHA3P29320 AC104971.1-201ENST00000495117 578 ntBASIC5.12□□□□□ -1.59
EPHA3P29320 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.12□□□□□ -1.59
EPHA3P29320 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.12□□□□□ -1.59
EPHA3P29320 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.12□□□□□ -1.59
EPHA3P29320 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.12□□□□□ -1.59
EPHA3P29320 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.12□□□□□ -1.59
EPHA3P29320 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.12□□□□□ -1.59
EPHA3P29320 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.12□□□□□ -1.59
EPHA3P29320 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.12□□□□□ -1.59
EPHA3P29320 AP002373.2-201ENST00000541631 1060 ntBASIC5.12□□□□□ -1.59
EPHA3P29320 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.12□□□□□ -1.59
EPHA3P29320 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EPHA3P29320 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.12□□□□□ -1.59
EPHA3P29320 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.12□□□□□ -1.59
EPHA3P29320 AL162431.4-201ENST00000604674 411 ntBASIC5.12□□□□□ -1.59
EPHA3P29320 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
EPHA3P29320 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
EPHA3P29320 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.12□□□□□ -1.59
EPHA3P29320 AC103706.2-201ENST00000638080 240 ntBASIC5.12□□□□□ -1.59
EPHA3P29320 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.12□□□□□ -1.59
EPHA3P29320 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
EPHA3P29320 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
EPHA3P29320 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
EPHA3P29320 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EPHA3P29320 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EPHA3P29320 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EPHA3P29320 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
EPHA3P29320 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.12□□□□□ -1.59
EPHA3P29320 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EPHA3P29320 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EPHA3P29320 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.11□□□□□ -1.59
EPHA3P29320 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.11□□□□□ -1.59
EPHA3P29320 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
EPHA3P29320 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
EPHA3P29320 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
EPHA3P29320 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
EPHA3P29320 AC005294.1-201ENST00000355509 281 ntBASIC5.11□□□□□ -1.59
EPHA3P29320 RNA5SP223-201ENST00000365174 120 ntBASIC5.11□□□□□ -1.59
EPHA3P29320 UBBP2-201ENST00000376781 231 ntBASIC5.11□□□□□ -1.59
EPHA3P29320 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
EPHA3P29320 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
EPHA3P29320 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.11□□□□□ -1.59
EPHA3P29320 AC006960.1-201ENST00000419980 153 ntBASIC5.11□□□□□ -1.59
EPHA3P29320 REREP1Y-201ENST00000422655 198 ntBASIC5.11□□□□□ -1.59
EPHA3P29320 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.11□□□□□ -1.59
EPHA3P29320 MTND6P12-201ENST00000428247 522 ntBASIC5.11□□□□□ -1.59
EPHA3P29320 CNOT7P1-201ENST00000429006 852 ntBASIC5.11□□□□□ -1.59
EPHA3P29320 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.11□□□□□ -1.59
EPHA3P29320 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.11□□□□□ -1.59
EPHA3P29320 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.11□□□□□ -1.59
EPHA3P29320 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.11□□□□□ -1.59
EPHA3P29320 UBE2D3P1-201ENST00000436669 444 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms