Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.67□□□□□ -1.5
POLR2AP24928 AC009097.3-201ENST00000563557 1018 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.67□□□□□ -1.5
POLR2AP24928 AP001267.4-201ENST00000602598 545 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 MTCO3P22-201ENST00000603219 784 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.67□□□□□ -1.5
POLR2AP24928 RNA5SP196-201ENST00000625967 102 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
POLR2AP24928 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
POLR2AP24928 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.67□□□□□ -1.5
POLR2AP24928 AC018628.1-201ENST00000624147 3819 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
POLR2AP24928 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.67□□□□□ -1.5
POLR2AP24928 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
POLR2AP24928 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
POLR2AP24928 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 AC002525.1-201ENST00000624392 1622 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
POLR2AP24928 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
POLR2AP24928 RNU1-85P-201ENST00000364127 164 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 AL445189.1-201ENST00000405722 338 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.66□□□□□ -1.5
POLR2AP24928 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC5.66□□□□□ -1.5
POLR2AP24928 MTND4LP13-201ENST00000425022 298 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.66□□□□□ -1.5
POLR2AP24928 NDUFB4P8-201ENST00000435351 367 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 AC023271.1-201ENST00000445936 1090 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 AL096829.2-201ENST00000446582 742 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
POLR2AP24928 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.66□□□□□ -1.5
POLR2AP24928 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.66□□□□□ -1.5
POLR2AP24928 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.66□□□□□ -1.5
POLR2AP24928 NDUFB4P11-201ENST00000560510 395 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 MIR4429-201ENST00000580105 73 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 CCDC58P3-201ENST00000590792 430 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 AP001160.4-201ENST00000596971 382 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 AC025588.2-201ENST00000604851 466 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 AC084035.1-201ENST00000634543 607 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
POLR2AP24928 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
POLR2AP24928 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.66□□□□□ -1.5
POLR2AP24928 AC009951.1-201ENST00000623674 2614 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
POLR2AP24928 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
POLR2AP24928 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
POLR2AP24928 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
POLR2AP24928 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
POLR2AP24928 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
POLR2AP24928 AC090017.1-201ENST00000548612 1779 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
POLR2AP24928 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
POLR2AP24928 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
POLR2AP24928 AC011933.1-201ENST00000413334 321 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 LINC01881-201ENST00000416103 412 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.66□□□□□ -1.5
POLR2AP24928 SEPT2P1-201ENST00000419651 180 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.66□□□□□ -1.5
POLR2AP24928 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
POLR2AP24928 AC116533.1-201ENST00000459748 321 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 RPL7P19-201ENST00000469948 618 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 AC105137.1-201ENST00000484355 562 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 RNU1-6P-201ENST00000516290 144 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 SNORA31.9-201ENST00000516429 84 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.66□□□□□ -1.5
POLR2AP24928 AC116553.2-201ENST00000564203 463 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.66□□□□□ -1.5
POLR2AP24928 AC006130.2-201ENST00000586202 326 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.66□□□□□ -1.5
POLR2AP24928 AC073091.2-201ENST00000603205 907 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 AC005034.4-201ENST00000603612 899 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.66□□□□□ -1.5
POLR2AP24928 AL445567.2-201ENST00000618935 498 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.66□□□□□ -1.5
POLR2AP24928 AC008785.1-201ENST00000624475 456 ntBASIC5.66□□□□□ -1.5
POLR2AP24928 SOCS5P3-201ENST00000425115 1576 ntBASIC5.65□□□□□ -1.5
POLR2AP24928 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
POLR2AP24928 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.65□□□□□ -1.5
POLR2AP24928 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
POLR2AP24928 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
POLR2AP24928 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
POLR2AP24928 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.65□□□□□ -1.5
POLR2AP24928 TCP1P3-201ENST00000414406 1498 ntBASIC5.65□□□□□ -1.5
POLR2AP24928 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
POLR2AP24928 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
POLR2AP24928 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
POLR2AP24928 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
POLR2AP24928 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
POLR2AP24928 STX3-208ENST00000641815 3236 ntBASIC5.65□□□□□ -1.5
POLR2AP24928 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
POLR2AP24928 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
POLR2AP24928 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
POLR2AP24928 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.65□□□□□ -1.5
POLR2AP24928 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
POLR2AP24928 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
POLR2AP24928 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
POLR2AP24928 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.51
POLR2AP24928 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
POLR2AP24928 RNU4-24P-201ENST00000364565 139 ntBASIC5.65□□□□□ -1.51
POLR2AP24928 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms