Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 UBTFL3-201ENST00000418934 1024 ntBASIC4.17□□□□□ -1.74
COL5A1P20908 AL162151.2-201ENST00000448875 158 ntBASIC4.17□□□□□ -1.74
COL5A1P20908 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.17□□□□□ -1.74
COL5A1P20908 UBTFL6-201ENST00000477929 1024 ntBASIC4.17□□□□□ -1.74
COL5A1P20908 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.17□□□□□ -1.74
COL5A1P20908 AC026782.2-201ENST00000510845 636 ntBASIC4.17□□□□□ -1.74
COL5A1P20908 RNA5SP519-201ENST00000516480 119 ntBASIC4.17□□□□□ -1.74
COL5A1P20908 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
COL5A1P20908 MIR6875-201ENST00000617506 72 ntBASIC4.17□□□□□ -1.74
COL5A1P20908 AL445363.3-201ENST00000623080 671 ntBASIC4.17□□□□□ -1.74
COL5A1P20908 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC4.17□□□□□ -1.74
COL5A1P20908 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL5A1P20908 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL5A1P20908 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
COL5A1P20908 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL5A1P20908 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.17□□□□□ -1.74
COL5A1P20908 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
COL5A1P20908 AC097634.1-201ENST00000604491 2467 ntBASIC4.17□□□□□ -1.74
COL5A1P20908 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.17□□□□□ -1.74
COL5A1P20908 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL5A1P20908 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL5A1P20908 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL5A1P20908 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
COL5A1P20908 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
COL5A1P20908 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
COL5A1P20908 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
COL5A1P20908 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
COL5A1P20908 RNA5SP36-201ENST00000410197 133 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 ARAFP1-201ENST00000422172 605 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.16□□□□□ -1.74
COL5A1P20908 RPL12P18-201ENST00000437175 325 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 AL031584.1-201ENST00000447169 754 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.16□□□□□ -1.74
COL5A1P20908 RPL23AP65-201ENST00000475608 468 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.16□□□□□ -1.74
COL5A1P20908 OR5BC1P-201ENST00000529327 739 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.16□□□□□ -1.74
COL5A1P20908 AC087499.8-201ENST00000578406 226 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 MIR3124-201ENST00000582636 67 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 HMGB2P1-201ENST00000591146 634 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.16□□□□□ -1.74
COL5A1P20908 AC084757.4-201ENST00000616350 526 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 AC012314.7-201ENST00000619693 93 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 AL357559.1-201ENST00000622228 274 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 AC008013.2-202ENST00000637965 364 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL5A1P20908 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.16□□□□□ -1.74
COL5A1P20908 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
COL5A1P20908 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
COL5A1P20908 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL5A1P20908 AC007529.1-201ENST00000418574 2178 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL5A1P20908 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL5A1P20908 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
COL5A1P20908 AC125336.1-201ENST00000508893 2827 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 VPS35P1-201ENST00000563400 1518 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL5A1P20908 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
COL5A1P20908 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.16□□□□□ -1.74
COL5A1P20908 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.16□□□□□ -1.74
COL5A1P20908 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL5A1P20908 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
COL5A1P20908 MIR449B-201ENST00000384995 97 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL5A1P20908 AP000357.1-201ENST00000409926 1165 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL5A1P20908 UBE2V1P3-201ENST00000439651 417 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 PTMAP3-201ENST00000447474 330 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 VN1R32P-201ENST00000452234 905 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 RPL5P32-201ENST00000454085 879 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.16□□□□□ -1.74
COL5A1P20908 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL5A1P20908 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.16□□□□□ -1.74
COL5A1P20908 RN7SKP46-201ENST00000515942 234 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 TRMT10BP1-201ENST00000519377 943 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL5A1P20908 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.16□□□□□ -1.74
COL5A1P20908 MIR3200-201ENST00000580767 85 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.16□□□□□ -1.74
COL5A1P20908 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.16□□□□□ -1.74
COL5A1P20908 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 AC015908.5-201ENST00000623289 343 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.16□□□□□ -1.74
COL5A1P20908 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.16□□□□□ -1.74
COL5A1P20908 AC006971.1-201ENST00000407916 4486 ntBASIC4.16□□□□□ -1.74
COL5A1P20908 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL5A1P20908 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
COL5A1P20908 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.15□□□□□ -1.74
COL5A1P20908 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.15□□□□□ -1.74
COL5A1P20908 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.15□□□□□ -1.74
COL5A1P20908 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC4.15□□□□□ -1.74
COL5A1P20908 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
COL5A1P20908 AL603750.1-201ENST00000624216 1717 ntBASIC4.15□□□□□ -1.74
COL5A1P20908 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
COL5A1P20908 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
COL5A1P20908 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.15□□□□□ -1.75
COL5A1P20908 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
COL5A1P20908 RN7SKP182-201ENST00000410772 298 ntBASIC4.15□□□□□ -1.75
COL5A1P20908 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms